National Committee on Marine Sciences (NCMS)
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- Seasonal variations in the yield, gelling properties, and chemical composition of agars from Gracilaria eucheumoides and Gelidiella acerosa (Rhodophyta) from the PhilippinesVillanueva, R. D.; Montaño, N. E.; Romero, J. B.; Aliganga, A. K. A.; Enriquez, E. P. (Walter de Gruyter GmbH, 1999-01-01)The yield, physical, and chemical properties of agars from two Philippine red seaweeds, Gracilaria eucheumoides and Gelidiella acerosa, were investigated on a bimonthly basis. The yield of agar from Gracilaria eucheumoides was at a maximum during the early rainy season (May, 29%) and at a minimum during the summer month of March (20%). In Gelidiella acerosa, a peak in agar yield was also recorded in May (21%), with generally higher yields recorded during the rainy than in the dry season. Agar gel strengths fluctuated from 225 to 430 g cm−2 and from 160 to 820 g cm−2 for Gracilaria eucheumoides and Gelidiella acerosa, respectively, and both agars exhibited strongest gels in July. Significant seasonal variations were observed in the gelling and melting temperatures of agar from Gracilaria eucheumoides, but not from Gelidiella acerosa. Sulphate content only varied slightly in agar samples from Gracilaria eucheumoides, while a higher sulphate content was found in Gelidiella acerosa agar during the dry season. Moreover, the sulphate content in G. acerosa agar fluctuated inversely with the 3,6-anhydrogalactose content. A FT-IR analysis showed a fairly constant spectrum for temporal Gracilaria eucheumoides agar while peaks attributed to S–O vibrations intensified in Gelidiella acerosa samples which were recorded to contain high sulphate residues and possess low gel strengths. Diagnosis of the FT-IR spectra in the 1000–400 cm−1 frequency range was also conducted in comparison with agarose and Gracilaria chilensis agar.
- Marine macroalgal reference culture collection at the University of the Philippines Marine Science Institute (UP-MMARCC): Status and prospects for advancing Philippine phycologySantiañez, Wilfred John E.; Guerta, Christian Ace T.; Lastimoso, John Michael L. (Assocation of Systematic Biologists in the Philippines, 2022-11-16)Seaweeds research in the Philippines-from studies on their diversity, natural products chemistry, and the utilization of their derivatives-is largely based on spot collections of large and conspicuous components of the seaweed flora found along the coasts. Such efforts are often focused on commercially important seaweeds; thus, most of the smaller and even microscopic seaweeds remain understudied, if not completely overlooked. Consequently, little to none is known on many aspects of the biology, ecology, and even biochemistry of these components of the Philippine seaweed flora. To understand aspects of seaweed biology and serve as a facility for preserving the genetic resources of Philippine seaweeds, we established the Marine Macroalgal Reference Culture Collection at the University of the Philippines Marine Science Institute (UP-MMARCC). We are currently maintaining 446 seaweed strains (or isolates) collected from several coastal and offshore areas in the Philippines, the latter including the Kalayaan Island Group in the West Philippine Sea, and 25 isolates from Okinawa, Japan. To our knowledge, the UP-MMARCC is the most diverse and widely sampled culture collection in the Philippines so far. Moreover, our preliminary molecular-assisted biodiversity studies suggest that UP-MMARCC houses several isolates that are either new records to the Philippines or putative new taxa. We anticipate that with continued support, we will be able to sustain and expand our culture collection, not only to facilitate discoveries but also to cater to the needs of the Philippine seaweed industry and in support of its call for diversifying our seaweed commodities and their products.
- Chemical characteristics and gelling properties of agar from two Philippine Gracilaria spp. (Gracilariales, Rhodophyta)Montaño, Nemesio E.; Villanueva, Ronald D.; Romero, Jumelita B. (Springer, 1999)The chemical structure of agars extracted from Philippine Gracilaria arcuata and G. tenuistipitata were determined by NMR and infrared spectroscopy. Agar with alternating 3-linked 6-O-methyl-β-D-galactopyranosyl and 4-linked 3,6-anhydro-2- O-methyl-α-L-galactopyranosyl units was isolated from G. arcuata, while the agar from G. tenuistipitata possesses the regular agarobiose repeating unit with partial methylation at the 6-position of the D-galactosyl residues. Both agars exhibit sulphate substitution at varying positions in the polymer. Chemical analyses reveal higher 3,6-anhydrogalactose and lower sulphate contents in alkali-modified than in native agar from both samples. Also, alkali modification enhanced agar gel strength and syneresis. Native G. arcuata agar produces a viscous solution (2000 cP at 75 °C) with a high gelling point (>60 °C) that forms a soft gel even after alkali modification (gel strength: <300 g cm−2). On the other hand, the agar from G. tenuistipitata exhibits gel qualities typical of most Gracilaria agars.
- Karyology and agar analysis of the agarophyte Gelidiella acerosa (Forsskål) Feldmannet Hamel from the PhilippinesKapraun, Donald F.; Ganzon-Fortes, Edna; Bird, Kimon T.; Trono, Gavino; Breden, Chris (Springer, 1994-12)Microspectrophotometry with the DNA-localizing fluorochrome DAPI demonstrated ploidy level differences in tetrasporophytic and presumptive gametophytic phases of Gelidiella acerosa from the Philippines. Comparison of mean nuclear DNA (I f ) values to chicken erythrocytes (RBC) resulted in an estimate of 0.32 pg/2 C genome. Karyological studies with aceto-orcein revealed a chromosome complement of six bivalents during diakinesis of tetrasporocytes. The agar yield ranges from 13–24% dry weight, depending on the method of extraction. Agar extraction in 1 N NaOH resulted in an increased gel strength of 189 g cm−2 at 1.5% concentration. Infrared spectroscopy indicated a relatively high sulfate content in native agar. The low (61 °) melting temperature is indicative of high sulfation and small molecular size.
- Quantification and characterization of nuclear genomes in commercial red seaweeds (Gracilariales) from the PhilippinesKapraun, Donald F.; Lopez-Bautista, Juan; Trono, Gavino; Bird, Kimon T. (Springer, 1996-03)Eight species of Gracilariaceae from the Philippines, representing the genera Gracilaria, Gracilariopsis and Hydropuntia, were investigated to quantify and characterize their nuclear genomes. DNA reassociation kinetics were used to determine nuclear genome organization and complexity in six of these species. Results indicate the presence of three second order components corresponding to fast, intermediate and slow fractions. Repetitive sequences varied from 13–74% and unique DNA ranged from 26–84%. Microspectrophotometry with the DNA-localizing fluorochrome DAPI was used to quantify nuclear DNA contents. Comparisons of mean nuclear DNA (I f ) values to chicken erythrocytes (RBC) resulted in an estimate of 0.38–0.43 pg/2 C genomes for seven of the species investigated. Preliminary analyses of agar content and quality confirm the economic potential of Gracilaria firma, Gracilaria sp. 2 from Sorsogon and Gracilariopsis bailinae. Nuclear genome profiles developed from data for genome size, organization and complexity are compared with data for agar quantity and quality. Gel quality and quantity do not appear to be correlated with either large repetitive fraction DNA or a high degree of genome complexity.
- Laboratory and field growth studies of commercial strains of Eucheuma denticulatum and Kappaphycus alvarezii in the PhilippinesDawes, Clinton J.; Lluisma, A. O.; Trono, G. C. (Springer, 1994-02)Daily growth rates of 0.1 to 8.4% d-1 for the brown form and 0.2 to 6.3% d-1 of the green form were measured for 3 to 5-cm long branches of the tropical red seaweed Kappaphycus alvarezii cultured in the laboratory. Highest growth rates were found using inexpensive enrichments such as soil water and coconut water supplemented with 0.7 mM N and 13 µM P and with a liquid fertilizer, Algafer, produced from seaweeds in the Philippines. Laboratory grown branches of both K. alvarezii and Eucheuma denticulatum transplanted to rafts in the field showed daily growth rates of 4.4 to 8.9% d-1, as high or higher than other reported growth rates. The studies, carried out in the Philippines, demonstrate the viability and high yield of laboratory cultivars and methods to keep laboratory culture costs low.
- Clonal propagation of Eucheuma denticulatum and Kappaphycus alvarezii for Philippine seaweed farmsDawes, C. J.; Trono, G. C.; Lluisma, A. O. (Springer, 1993-06)Technique improvement and cost reduction of branch culture, micropropagation, and callus production of carrageenan-yielding seaweeds Kappaphycus alvarezii and Eucheuma denticulatum is presented. Low cost branch culture is possible by enriching seawater with 0.1% coconut water with 1 mg l−1 indole-3-butyric acid for 24 h wk−1 or continuous culture with 0.01% Algafer, a Philippine fertilizer. Micropropagation of 0.5 cm explants had almost 100% new branch production demonstrating the viability of callus regenerated plants. The use of carrageenan as a media for callus production was not effective when compared to agar. Propagules of both species, transferred from the University of the Philippine Marine Science Institute (UPMSI) culture facility to the field, showed daily percent growth rates of 5 to 5.5% d−1 over 84 days. Based on the costs of the UPMSI laboratory, a culture facility in the seaweed farming area is estimated to cost about U. S. $22000 during the initial year and 58% less the second year.
- Genetic diversity of Kappaphycus malesianus (Solieriaceae, Rhodophyta) from the PhilippinesDumilag, Richard V.; Crisostomo, Bea A.; Aguinaldo, Zae-Zae A.; Lluisma, Arturo O.; Gachon, Claire M.M.; Roleda, Michael Y. (Elsevier, 2023-07)Kappaphycus farming for carrageenan production is characterized by a strong selective pressure at the genetic level. Traits of agronomic importance are compromised due to domestication bottlenecks and the subsequent events of possible selective breeding of founding cultivars. Kappaphycus malesianus is farmed in Malaysia and the Philippines, and is distributed within the Malesian region. While the majority of genetically characterized specimens of this species are from Malaysia, those from the Philippines are poorly explored. Here, we assessed the genetic diversity of K. malesianus from the Philippines based on cox1 sequences. Of the 15 identified haplotypes, 14 specimens represent three novel haplotypes (wild specimens) that form a group distinct from the main clade comprising most K. malesianus haplotypes known to date. An additional haplotype from a cultivated specimen was identical to that of the most widely distributed haplotype. Our findings demonstrate that the K. malesianus is genetically more diverse than previously recognized. It is expected that higher genetic diversity may be revealed through additional sampling from a wider geographic range and careful application of integrative approaches. Future selective breeding programs in Kappaphycus would benefit from the incorporation of the genetic resources, as provided in this study.
- The farmed Eucheuma species (Gigartinales, Rhodophyta) in Danajon Reef, Philippines: Carrageenan propertiesAzanza-Corrales, R.; Sa-a, P. (Springer, 1990-09)Six cultured ‘strains’ of Eucheuma denticulatum and E. alvarezii, from which stocks can be selected for the development of a Eucheuma ‘seedling bank’, were tested for their carrageenan quality from June to November 1988. Percent yield of all the varieties taken together was apparently higher in June, becoming lower in November (regression, r −0.785, probability, p ⩽ 0.001). Stepwise regression analysis was done to determine the existence of any relationship between any of the following parameters: gel strength, viscosity, sulfate content, month of sampling, and yield, whether taken individually or in combination. Results show variations of the yield with the month of sampling. ANOVA was performed to test whether there are differences in sulfate levels, gel strength, and viscosity between the Eucheuma alvarezii morphotypes. There was no significant difference between the green and the brown types.