Challenge 01: Understand and beat marine pollution

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Ocean Decade

Challenge 01:
Understand and beat marine pollution

Understand and map land and sea-based sources of pollutants and contaminants and their potential impacts on human health and ocean ecosystems and develop solutions to remove or mitigate them.

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Water quality bioassays in two Bermudan harbours using the ciliate Euplotes vannus, in relation to tributyltin distribution
Slabbing, A. R. D.; Soria, S.; Burt, G. R.; Cleary, J. J. (Elsevier, 1990-01)
Laboratory cultures of the ciliate Euplotes vannus were used to bioassay water samples taken from the sea surface, 0.5 m and near bottom at stations along contamination gradients in Castle Harbour and Hamilton Harbour on Bermuda. Inhibition of population growth rate was used as an index of exposure to toxic contaminants. Significant differences in growth rates from near-bottom water samples taken at two stations in Castle Harbour were reflected in differing sediment concentrations of metals and petroleum hydrocarbons. Bioassays of four Hamilton Harbour samples indicated significant differences between control and contaminated sites when results from all three depths were pooled. Highest concentrations of tributyltin (⩽ 307 ng TBT·1−1) occurred in the surface microlayer, though measurements varied widely on the two sampling occasions. At 0.5 m, concentrations were much less variable and showed a steady decline from the head of Hamilton Harbour (41 ng TBT· 1−1) seawards to the control site (0.9 ng TBT · 1−1). While these concentrations are high enough to be toxic to some species, it is known from experimental work that TBT alone could not have accounted for the depression of ciliate growth rates in these bioassays.
Marine environmental problems: Experiences of developing regions
Yap, Helen T. (Elsevier BV, 1992-01)
The marine environmental problems of developing regions are a particular cause for concern because of the great dependence of their human populations on marine resources for survival, and because a significant portion of the world's natural heritage is threatened. Of the problems, the destruction of shallow-water ecosystems and organic (sewage) pollution are the most prominent. The environmental issues typical for Third World countries are clearly related to their socioeconomic conditions, so that attempts at solutions must possess an adequately broad perspective, i.e. they must consider all relevant aspects of a problem. There is also a great need to strengthen the capabilities of developing nations to care for their own environment.
Preliminary study of the redistribution and transformation of HgS from cinnabar mine tailings deposited in Honda Bay, Palawan, Philippines
Benoit, Gaboury; Schwantes, Jon M.; Jacinto, Gil S.; Goud-Collins, Margaret R. (Elsevier, 1994-12)
Mining operations in Palawan, Philippines, resulted in cinnabar (HgS) mine tailings being used to build a 600 m long peninsula in Honda Bay. Samples collected from the peninsula as well as sediments from the surrounding waters had elevated mercury levels as high as 570 ppm. Natural processes are transporting mercury as much as 10 km from the peninsula, mainly in a coastwise direction, and preferentially associated with fine-grained, organic-rich sediments. Depth of penetration into sediments exceeds 10 cm near the source. As the HgS is transported away from the peninsula, it is rapidly altered to more bioavailable forms; 50% conversion occurs within a distance of only 10–40 m.
Heavy metal fluxes in Bang Pakong River Estuary, Thailand: Sedimentary vs diffusive fluxes
Cheevaporn, V.; Jacinto, G. S.; San Diego-McGlone, M. L. (Elsevier BV, 1995-04)
Estimates of the flux of heavy metals into the sediments (sedimentary flux) of Bang Pakong River Estuary and the diffusive flux of these metals across the sediment-water interface provide quantitative approximations on the movement of heavy metals from the water column into the sediments, and vice versa. Results showed higher sedimentary flux of Cu, Pb, Zn, Cd, Cr and Ni (0.1–16.8 μg cm−2 yr−1) relative to the diffusive flux of these metals (0.01–4.8 μg cm−2 yr−1). The percentage diagenetic contribution (ratio of diffusive flux to sedimentary flux) of these metals ranged from 10–91%. This suggests that diagenetic remobilization and release of these metals from the sediments into the overlying water may contribute to the subsequent redeposition of these metals into the sediments. Metal enrichment at the surface sediments when compared with deeper sections of the sediment may not necessarily be interpreted as evidence of recent natural, anthropogenic inputs alone, but may also be a consequence of the deposition of metals previously released from the sediments through diagenesis.
Nutrient mediated stress on the marine communities of a coastal lagoon (Puerto Galera, Philippines)
San Diego-McGlone, M.L.; Villanoy, C.L.; Aliño, P.M. (Elsevier, 1995-04)
Puerto Galera Bay is a coastal lagoon with a variety of marine habitats and high species diversity. It is an area in the Phillippines where the growing influence of human activities is affecting the quality of its marine resources. This study examined the distribution and behaviour of nutrients and the physical hydrography of Puerto Galera Bay and determined how its physico-chemical nature affected the condition of biotic components in the bay. The relative importance of the nitrogen and phosphorus signals were used as indicators to implicate the influence of sewage and run-off into the bay. A nutrient pool accumulated in the bay as a result of low flushing rates. The interaction of hydrodynamic forcing with the biota have implications on the phytoplankton production and coral communities in the area.
Petrology and geochemistry of Camiguin Island, southern Philippines: insights to the source of adakites and other lavas in a complex arc setting
Castillo, Paterno R.; Janney, Philip E.; Solidum, Renato Jr. U. (Springer Science and Business Media LLC, 1999-01-21)
Camiguin is a small volcanic island located 12 km north of Mindanao Island in southern Philippines. The island consists of four volcanic centers which have erupted basaltic to rhyolitic calcalkaline lavas during the last ∼400 ka. Major element, trace element and Sr, Nd and Pb isotopic data indicate that the volcanic centers have produced a single lava series from a common mantle source. Modeling results indicate that Camiguin lavas were produced by periodic injection of a parental magma into shallow magma chambers allowing assimilation and fractional crystallization (AFC) processes to take place. The chemical and isotopic composition of Camiguin lavas bears strong resemblance to the majority of lavas from the central Mindanao volcanic field confirming that Camiguin is an extension of the tectonically complex Central Mindanao Arc (CMA). The most likely source of Camiguin and most CMA magmas is the mantle wedge metasomatized by fluids dehydrated from a subducted slab. Some Camiguin high-silica lavas are similar to high-silica lavas from Mindanao, which have been identified as “adakites” derived from direct melting of a subducted basaltic crust. More detailed comparison of Camiguin and Mindanao adakites with silicic slab-derived melts and magnesian andesites from the western Aleutians, southernmost Chile and Batan Island in northern Philippines indicates that the Mindanao adakites are not pure slab melts. Rather, the CMA adakites are similar to Camiguin high-silica lavas which are products of an AFC process and have negligible connection to melting of subducted basaltic crust.
Defending Philippine maritime territory and marine resources: Initiatives and problems
Carranza, Ruben R., Jr. (Philippine Council for Aquatic and Marine Research and Development, 2002)
The significance of the Philippines' maritime territory and the complexities of its defense are examined. The speaker highlights the integral role of the country's waters in trade, food security, and resource provision. Challenges, including naval limitations and maritime intrusions, are presented, followed by a discussion of defense strategies like selective sea control. The speech concludes with a call for decisive policy actions, diplomatic solutions to territorial conflicts, and improved capabilities to safeguard the nation's maritime interests.
Ocean mapping and other marine activities of the National Mapping and Resource Information Authority (NAMRIA)
Carandang, Efren P. (Philippine Council for Aquatic and Marine Research and Development, 2002)
This paper describes the various marine activities being undertaken by the National Mapping and Resource Information Authority (NAMRIA) pursuant to its mandate as the central surveying, mapping and resource information agency of the government. NAMRIA gathers marine data through periodic hydrographic and oceanographic surveys and remote sensing techniques, and publishes the results in the form of nautical charts, bathymetric maps and other thematic maps. It also creates marine geographic information systems and databases. As steward of the National Oceanographic Data Center (NODC), the agency participates in international oceanographic data exchange programs, and also serves the marine data and information needs of the local marine science community. NAMRIA's data collection capability got a big boost with the acquisition this year of two multi-disciplinary survey vessels with state-of-the-art systems. With these vessels as platforms, NAMRIA will embark on the comprehensive charting of the Exclusive Economic Zone, and collaborate with the different marine science agencies in the conduct of multi-disciplinary oceanographic cruises.
Effects of environmental regulations on heavy metal pollution decline in core sediments from Manila Bay
Hosono, Takahiro; Su, Chih-Chieh; Siringan, Fernando; Amano, Atsuko; Onodera, Shin-ichi (Elsevier, 2010)
We investigated the high-resolution heavy metal pollution history of Manila Bay using heavy metal concentrations and Pb isotope ratios together with 210Pb dating to find out the effects of environmental regulations after the 1990s. Our results suggested that the rate of decline in heavy metal pollution increased dramatically from the end of the 1990s due to stricter environmental regulations, Administrative Order No. 42, being enforced by the Philippines government. The presented data and methodology should form the basis for future monitoring, leading to pollution control, and to the generation of preventive measures at the pollution source for the maintenance of environmental quality in the coastal metropolitan city of Manila. Although this is the first report of a reduction in pollution in Asian developing country, our results suggest that we can expect to find similar signs of pollution decline in other parts of the world as well.
17-year change in species composition of mixed seagrass beds around Santiago Island, Bolinao, the northwestern Philippines
Tanaka, Yoshiyuki; Go, Gay Amabelle; Watanabe, Atsushi; Miyajima, Toshihiro; Nakaoka, Masahiro; Uy, Wilfredo H.; Nadaoka, Kazuo; Watanabe, Shuichi; Fortes, Miguel D. (Elsevier, 2014)
Effects of fish culture can alter the adjacent ecosystems. This study compared seagrass species compositions in 2012 with those in 1995, when fish culture was less intensive compared to 2012 in the region. Observations were conducted at the same four sites around Santiago Island, Bolinao: (1) Silaqui Island, (2) Binaballian Loob, (3) Pislatan and (4) Santa Barbara, and by using the same methods as those of Bach et al. (1998). These sites were originally selected along a siltation gradient, ranging from Site 1, the most pristine, to Site 4, a heavily silted site. By 2012, fish culture had expanded around Sites 2, 3 and 4, where chlorophyll a (Chl a) was greater in 2012 than in 1995 by one order of magnitude. Enhalus acoroides and Cymodocea serrulata, which were recorded in 1995, were no longer present at Site 4, where both siltation and nutrient load are heavy.
Phosphorus as a driver of nitrogen limitation and sustained eutrophic conditions in Bolinao and Anda, Philippines, a mariculture-impacted tropical coastal area
Ferrera, Charissa M.; Watanabe, Atsushi; Miyajima, Toshihiro; San Diego-McGlone, Maria Lourdes; Morimoto, Naoko; Umezawa, Yu; Herrera, Eugene; Tsuchiya, Takumi; Yoshikai, Masaya; Nadaoka, Kazuo (Elsevier, 2016)
The dynamics of nitrogen (N) and phosphorus (P) was studied in mariculture areas around Bolinao and Anda, Philippines to examine its possible link to recurring algal blooms, hypoxia and fish kills. They occur despite regulation on number of fish farm structures in Bolinao to improve water quality after 2002, following a massive fish kill in the area. Based on spatiotemporal surveys, coastal waters remained eutrophic a decade after imposing regulation, primarily due to decomposition of uneaten and undigested feeds, and fish excretions. Relative to Redfield ratio (16), these materials are enriched in P, resulting in low N/P ratios (~ 6.6) of regenerated nutrients. Dissolved inorganic P (DIP) in the water reached 4 μM during the dry season, likely exacerbated by increase in fish farm structures in Anda. DIP enrichment created an N-limited condition that is highly susceptible to sporadic algal blooms whenever N is supplied from freshwater during the wet season.
Variation in macrofaunal communities of sea grass beds along a pollution gradient in Bolinao, northwestern Philippines
Leopardas, Venus; Honda, Kentaro; Go, Gay Amabelle; Bolisay, Klenthon; Pantallano, Allyn Duvin; Uy, Wilfredo; Fortes, Miguel; Nakaoka, Masahiro (Elsevier, 2016)
This study examined the variation of macrofaunal communities in sea grass beds along a pollution gradient in Bolinao, northwestern Philippines. We established four stations and compared the diversity and abundance of macrofauna between them. The Shannon diversity index in the least polluted station was more than twice higher than that in the most polluted one. Abundance was more than thrice higher in the most polluted station. The species composition generally varied, with community difference explained largely by the predominance of the filter-feeding bivalve Gafrarium pectinatum and polychaete Capitella capitata. Species heterogeneity was reduced along the pollution gradient by approximately 19% from the least polluted to the most polluted station. This reduction indicates biodiversity alteration, which has a significant impact on ecosystem functioning. Aspects of species heterogeneity should be considered in environmental impact assessments and the management of coastal areas encountered with anthropogenic disturbances.
A synthesis and review of historical eruptions at Taal Volcano, Southern Luzon, Philippines
Delos Reyes, Perla J.; Bornas, Ma. Antonia V.; Dominey-Howes, Dale; Pidlaoan, Abigail C.; Magill, Christina R.; Solidum, Renato Jr. U. (Elsevier BV, 2018-02)
The Philippines is an area of persistent volcanism, being located in one of the most tectonically active regions in the world. Taal Volcano in Southern Luzon is the second most frequently erupting volcano of the 24 active volcanoes in the Philippines. A comprehensive and critical review of published and unpublished references describing the 33 known historical eruptions of Taal may provide answers to knowledge gaps on past eruptive behavior, processes, and products that could be utilized for hazard and risk assessment of future eruptions. Data on the prehistoric eruptions and evolution of Taal Caldera and subsequent deposits are limited. Only four caldera-forming events were identified based on four mapped ignimbrite deposits. From oldest to youngest, these are the silicic Alitagtag (ALI) and Caloocan (CAL) Pumice Flow deposits, the dacitic Sambong Ignimbrite (SAM), and the basaltic-andesitic Taal Scoria Flow, renamed Scoria Pyroclastic Flow (SFL). Except for SFL with 14C dating yielding 5380 ± 70 to 6830 ± 80 ky, there are no age constraints or estimates of extent for the three older deposits. A comprehensive review of the historical eruptions of Taal Volcano is the central element of this paper and includes all eruptions from AD1572 (the first known historic event) to AD1977. Eruption styles and the interplay between processes and products for each eruption are reinterpreted based on the narrative descriptions from all available accounts. A change of classification of eruption styles and eruptive products is undertaken for some events. At least nine reported eruptions were deemed uncertain including the AD1605-AD1611 event (more likely seismic swarms), the AD1634, AD1635, and AD1645 (may simply be solfataric or hydrothermal activity) events, and the AD1790, AD1825, AD1842, AD1873 and AD1903 events that were listed in recent published and unpublished documents but do not provide any details to describe and confirm the eruptions except for listing a default VEI of 2. Pyroclastic density currents brought devastating impacts to the communities around Taal during the AD1749, AD1754, AD1911 and AD1965 eruptions and remain the biggest threat in the case of renewed volcanic activity. Significant implications for aviation are implied by the narrative of tephra fall dispersal towards Manila, the central gateway of international aviation operation in the Philippines, during the AD1754 eruptions. The dispersal of tephra in the event of an explosive eruption at Taal towards Metro Manila would have catastrophic effects to transport, utilities and business activity, potentially generating enormous economic losses. Hazards from earthquake events associated with future volcanic activity may also have localized impacts. Occurrences of liquefaction phenomena as a consequence of severe ground shaking are interpreted during the AD1749, AD1754, and AD1911 eruptions. More work needs to be done to develop a comprehensive understanding of the hazards and risks associated with an explosive eruption at Taal Volcano, especially related to the older Quaternary caldera-forming eruptions that produced large-volume pyroclastic deposits that are extensively distributed and exposed. We acknowledge that there may be additional prehistoric eruptions where the eruptive products have not been preserved, recognized or reported. Events that cannot be verified or do not have sufficient details to confirm the eruption, have been downgraded to “uncertain”. Eruptions that are confirmed with identified dispersal and emplacement of tephra fall and other eruptive deposits, as interpreted from narrated records, could provide crucial information that may be utilized in hazard assessment.
Taxonomy and toxin production of Gambierdiscus carpenteri (Dinophyceae) in a tropical marine ecosystem: The first record from the Philippines
Vacarizas, Joshua; Benico, Garry; Austero, Nero; Azanza, Rhodora (Elsevier, 2018-12)
Morphological and phylogenetic analysis showed that the Gambierdiscus isolate from Bolinao, Philippines belongs to the species of G. carpenteri. It was morphologically more similar to the Merimbula strain than the subtropical Florida Keys strain. Growth and toxin production were also investigated at varying levels of temperature, salinity, and irradiance. Gambierdiscus are known to grow favorably in a low light environment. However, this study showed high growth rates of G. carpenteri even at high irradiance levels. Generally, cells produced more toxins at lower treatment levels. Highest cellular toxin content recorded was 7.48 ± 0.49 pg Pbtx eq/cell at culture conditions of 25 °C, 100 μmol photons m−2 s−1, and salinity of 26. Growth rate and toxin production data suggest that cells produced more toxins during the slowest growth at certain range of treatments. This information gives insight into how changes in environmental conditions may affect toxin production and growth of G. carpenteri.
Fish farm effluents alter reef benthic assemblages and reduce coral settlement
Quimpo, Timothy Joseph R.; Ligson, Charlon A.; Manogan, Dana P.; Requilme, Jeremiah Noelle; Albelda, Ritzelle L.; Conaco, Cecilia; Cabaitan, Patrick C. (Elsevier Ltd., 2020)
Fish farming in coastal areas is a rapidly growing industry. However, unregulated fish farming practices that release massive amounts of unconsumed feed and fecal material into the water column, can result in a nutrient enriched environment that extends to nearby reef systems. To understand the impact of fish farm effluent on coral settlement, we tested the settlement rate of Pocillopora acuta larvae on artificial substrates conditioned for 12 weeks at three sites with increasing distance (2–10 km) from fish farms in Bolinao, Philippines. Sites far from the fish farms had higher biofilm and crustose coralline algae cover. In contrast, the site closest to the fish farms, where nutrient levels were higher, had greater sediment and turf algae cover. Tiles conditioned at the farther sites promoted higher (6–8%) larval settlement whereas tiles from the nearer site had lower settlement (3%). These findings show that fish farm effluents can indirectly affect coral settlement on adjacent reefs by promoting growth of other biota that may inhibit larval settlement and by reducing the availability of suitable substrate.
Growth, nitrate uptake kinetics, and biofiltration potential of eucheumatoids with different thallus morphologies
Narvarte, Bienson Ceasar V.; Genovia, Tom Gerald T.; Hinaloc, Lourie Ann R.; Roleda, Michael Y. (Wiley, 2021-12-30)
The declining production of commercially important eucheumatoids related to serious problems like increasing susceptibility to ice‐ice disease and epiphytism may be ameliorated by nutrition. This ushered to an increasing interest in incorporating seaweeds into an integrated multi‐trophic aquaculture (IMTA) setup to take up excess inorganic nutrients produced by fish farms for their nourishment. In this regard, it is important to understand the nutrient uptake capacity of candidate seaweeds for incorporation in an IMTA system. Here, we examined the growth, nitrate (NO3‐) uptake kinetics and biofiltration potential of Eucheuma denticulatum and three strains of Kappaphycus alvarezii (G‐O2, TR‐C16 and SW‐13) with distinct thallus morphologies. The NO3‐ uptake rates of the samples were determined under a range of NO3‐ concentration (1‐ 48 µM) and uptake rates were fitted to the Michaelis‐Menten saturation equation. Among the examined eucheumatoids, only SW‐13 had a linear response to NO3‐ concentration while other strains had uptake rates that followed the Michaelis‐Menten saturation equation. Eucheuma denticulatum had the lowest Km (9.78 ± 1.48 µM) while G‐O2 had the highest Vmax (307 ± 79.3 µmol · g‐1 · min‐1). The efficiency in NO3‐ uptake (highest Vmax/Km and α) was translated into the highest growth rate (3.41± 0.58 % · d‐1) measured in E. denticulatum. Our study provided evidence that eucheumatoids could potentially take up large amount of NO3‐ and fix CO2 when cultivated proximate to a fish farm as one component of an IMTA system. During a 45‐d cultivation period of eucheumatoids, as much as 370 g NO3‐ can be sequestered by every 1 kg initial biomass E. denticulatum growing at 3% · d‐1. Furthermore, based on our unpublished photosynthetic measurements, the congeneric K. striatus can fix 27.5 g C · kg‐1 DW during a 12‐h daylight period.
Global mass spectrometric analysis reveals chemical diversity of secondary metabolites and 44-Methylgambierone production in Philippine Gambierdiscus strains
Malto, Zabrina Bernice L.; Benico, Garry A.; Batucan, Jeremiah D.; Dela Cruz, James; Romero, Marc Lawrence J.; Azanza, Rhodora V.; Salvador-Reyes, Lilibeth A. (Frontiers Media SA, 2022-02-04)
Surveillance and characterization of emerging marine toxins and toxigenic dinoflagellates are warranted to evaluate their associated health risks. Here, we report the occurrence of the ciguatera poisoning-causative dinoflagellate Gambierdiscus balechii in the Philippines. Toxin production and chemical diversity of secondary metabolites in G. balechii GtoxSAM092414, G. balechii Gtox112513, and the recently reported Gambierdiscus carpenteri Gam1BOL080513 were assessed using targeted and untargeted UPLC-MS/MS analysis and radioligand receptor-binding assay (RBA). 44-methylgambierone was produced by all three strains, albeitwith different levels based on RBA and UPLC-HRMS/MS analysis. The fatty acid composition was similar in all strains, while subtle differences in monosaccharide content were observed, related to the collection site rather than the species. Molecular networking using the GNPS database identified 45 clusters belonging to at least ten compound classes, with terpene glycosides, carbohydrate conjugates, polyketides, and macrolides as major convergence points. Species-specific peptides and polyhydroxylated compounds were identified in G. balechii GtoxSAM092414 and G. carpenteri Gam1BOL080513, respectively. These provide a glimpse of the uncharacterized biosynthetic potential of benthic dinoflagellates and highlight the intricate and prolific machinery for secondary metabolites production in these organisms.
We would like to thank H. Junio and the Secondary Metabolites Profiling Laboratory of the Institute of Chemistry, University of the Philippines Diliman and K. B. Davis for assistance in the conduct of this study.
Multifaceted assessment of wastewater-based epidemiology for SARS-CoV-2 in selected urban communities in Davao City, Philippines: A pilot study
Otero, Maria Catherine B.; Murao, Lyre Anni E.; Limen, Mary Antoinette G.; Caalim, Daniel Rev A.; Gaite, Paul Lorenzo A.; Bacus, Michael G.; Acaso, Joan T.; Miguel, Refeim M.; Corazo, Kahlil; Knot, Ineke E.; Sajonia, Homer; de los Reyes, Francis L.; Jaraula, Caroline Marie B.; Baja, Emmanuel S.; Del Mundo, Dann Marie N. (MDPI, 2022-07-19)
Over 60 countries have integrated wastewater-based epidemiology (WBE) in their COVID-19 surveillance programs, focusing on wastewater treatment plants (WWTP). In this paper, we piloted the assessment of SARS-CoV-2 WBE as a complementary public health surveillance method in susceptible communities in a highly urbanized city without WWTP in the Philippines by exploring the extraction and detection methods, evaluating the contribution of physico-chemical–anthropogenic factors, and attempting whole-genome sequencing (WGS). Weekly wastewater samples were collected from sewer pipes or creeks in six communities with moderate-to-high risk of COVID-19 transmission, as categorized by the City Government of Davao from November to December 2020. Physico-chemical properties of the wastewater and anthropogenic conditions of the sites were noted. Samples were concentrated using a PEG-NaCl precipitation method and analyzed by RT-PCR to detect the SARS-CoV-2 N, RdRP, and E genes. A subset of nine samples were subjected to WGS using the Minion sequencing platform. SARS-CoV-2 RNA was detected in twenty-two samples (91.7%) regardless of the presence of new cases. Cycle threshold values correlated with RNA concentration and attack rate. The lack of a sewershed map in the sampled areas highlights the need to integrate this in the WBE planning. A combined analysis of wastewater physico-chemical parameters such as flow rate, surface water temperature, salinity, dissolved oxygen, and total dissolved solids provided insights on the ideal sampling location, time, and method for WBE, and their impact on RNA recovery. The contribution of fecal matter in the wastewater may also be assessed through the coliform count and in the context of anthropogenic conditions in the area. Finally, our attempt on WGS detected single-nucleotide polymorphisms (SNPs) in wastewater which included clinically reported and newly identified mutations in the Philippines. This exploratory report provides a contextualized framework for applying WBE surveillance in low-sanitation areas.
The authors thank the Davao City Health Office, the local government units under the City Government of Davao, the partner hospitals for their support and assistance, and Diana Aga for discussions on sample collection and analyses. The authors would also like to thank the members of the Bortz Virology Laboratory at the University of Alaska Anchorage- Ralf Dagdag and Matthew Redlinger, Amanda Warr from the Roslin Institute, Nicole Wheeler from the University of Birmingham, Lara Urban, co-founder of PuntSeq, and Joe Russell from MRI Global for their expert advice in nanopore and wastewater sequencing.
Sea surface carbonate dynamics at reefs of Bolinao, Philippines: Seasonal variation and fish mariculture-induced forcing
Isah, Raffi R.; Enochs, Ian C.; San Diego-McGlone, Maria Lourdes (Frontiers, 2022-11-11)
Coral reefs are vulnerable to global ocean acidification (OA) and local human activities will continue to exacerbate coastal OA. In Bolinao, Philippines, intense unregulated fish mariculture has resulted in regional eutrophication. In order to examine the coastal acidification associated with this activity and the impact on nearby coral reefs, water quality and carbonate chemistry parameters were measured at three reef sites, a mariculture site and an offshore, minimally impacted control site during both the wet and dry season. Additionally, benthic community composition was characterized at reef sites, and both autonomous carbonate chemistry sampling and high-frequency pH measurements were used to characterize fine-scale (diel) temporal variability. Water quality was found to be poorer at all reefs during the wet season, when there was stronger outflow of waters from the mariculture area. Carbonate chemistry parameters differed significantly across the reef flat and between seasons, with more acidic conditions occurring during the dry season and increased primary production suppressing further acidification during the wet season. Significant relationships of both total alkalinity (TA) and dissolved inorganic carbon (DIC) with salinity across all stations may imply outflow of acidified water originating from the mariculture area where pH values as low as 7.78 were measured. This apparent mariculture-induced coastal acidification was likely due to organic matter respiration as sustained mariculture will continue to deliver organic matter. While TA-DIC vector diagrams indicate greater contribution of net primary production, net calcification potential in the nearest reef to mariculture area may already be diminished. The two farther reefs, characterized by higher coral cover, indicates healthier ecosystem functioning. Here we show that unregulated fish mariculture activities can lead to localized acidification and impact reef health. As these conditions at times approximate those projected to occur globally due to OA, our results may provide insight into reef persistence potential worldwide. These results also underscore the importance of coastal acidification and indicate that actions taken to mitigate OA on coral reefs should address not only global CO2 emissions but also local perturbations, in this case fish mariculture-induced eutrophication.
This paper is part of the master’s thesis of RI supervised by MS-M entitled “Carbonate chemistry dynamics on the Bolinao reef flat”. The authors are grateful to the Marine Biogeochemistry Laboratory and Bolinao Marine Laboratory of the Marine Science Institute, University of the Philippines for the valuable logistical and laboratory support provided. We thank Jay Burce, Ryan Carl Magyaya, Natasha Tamayo for their tremendous help in field activities and laboratory analyses. We thank Alice Webb for providing insights into improving the manuscript.
Potential of sediment bacterial communities from Manila Bay (Philippines) to degrade low-density polyethylene (LDPE)
Gomez, Norchel Corcia F.; Onda, Deo Florence L. (Springer, 2022-12-24)
The persistence of plastics and its effects in different environments where they accumulate, particularly in coastal areas, is of serious concern. These plastics exhibit signs of degradation, possibly mediated by microorganisms. In this study, we investigated the potential of sediment microbial communities from Manila Bay, Philippines, which has a severe plastics problem, to degrade low-density polyethylene (LDPE). Plastics in selected sites were quantified and sediment samples from sites with the lowest and highest plastic accumulation were collected. These sediments were then introduced and incubated with LDPE in vitro for a period of 91 days. Fourier transform infrared spectroscopy detected the appearance of carbonyl and vinyl products on the plastic surface, indicating structural surface modifications attributed to polymer degradation. Communities attached to the plastics were profiled using high-throughput sequencing of the V4-V5 region of the 16S rRNA gene. Members of the phylum Proteobacteria dominated the plastic surface throughout the experiment. Several bacterial taxa associated with hydrocarbon degradation were also enriched, with some taxa positively correlating with the biodegradation indices, suggesting potential active roles in the partial biodegradation of plastics. Other taxa were also present, which might be consuming by-products or providing nourishment for other groups, indicating synergy in utilizing the plastic as the main carbon source and creation of a microenvironment within the plastics biofilm. This study showed that sediment microbes from Manila Bay may have naturally occurring microbial groups potentially capable of partially degrading plastics, supporting previous studies that the biodegradation potential for plastics is ubiquitously present in marine microbial assemblages.
We would like to acknowledge the Protected Area Management and Biodiversity Section of the Conservation and Development Division of the Department of Environment and Natural Resources—National Capital region for allowing us to conduct field work in LPPCHEA. As well as local government units of Brgy. Bucana in Ternate, Brgy. Bucana Malaki in Naic, Brgy. San Rafael III in Noveleta, and Brgy. Baseco in Manila for allowing us to conduct field work and sample collection. We would also like to acknowledge the Marine Research Center under the Marine Environmental Protection Command of the Philippine Coast Guard for providing assistance during one of our fieldworks. Members of the Microbial Oceanography Laboratory for helping during field works. And to Daniel John E. Purganan and Justine Marey S. Bitalac for helping us obtain CLS micrographs.