Journal Articles - UP - MSI
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- Summer heatwave impacts on the European kelp Saccharina latissima across its latitudinal distribution gradientDiehl, Nora; Roleda, Michael Y.; Bartsch, Inka; Karsten, Ulf; Bischof, Kai (Frontiers Media SA, 2021-10-11)Kelps are important foundation species in coastal ecosystems currently experiencing pronounced shifts in their distribution patterns caused by ocean warming. While some populations found at species’ warm distribution edges have been recently observed to decline, expansions of some species have been recorded at their cold distribution edges. Reduced population resilience can contribute to kelp habitat loss, hence, understanding intraspecific variations in physiological responses across a species’ latitudinal distribution is crucial for its conservation. To investigate potential local responses of the broadly distributed kelp Saccharina latissima to marine heatwaves in summer, we collected sporophytes from five locations in Europe (Spitsbergen, Bodø, Bergen, Helgoland, Locmariaquer), including populations exposed to the coldest and warmest local temperature regimes. Meristematic tissue from sporophytes was subjected to increasing temperatures of Δ+2, Δ+4 and Δ+6°C above the respective mean summer temperatures (control, Δ±0°C) characteristic for each site. Survival and corresponding physiological and biochemical traits were analyzed. Vitality (optimum quantum yield, Fv/Fm) and growth were monitored over time and biochemical responses were measured at the end of the experiment. Growth was highest in northern and lowest in southern populations. Overall, northern populations from Spitsbergen, Bodø and Bergen were largely unaffected by increasing summer temperatures up to Δ+6°C. Conversely, sporophytes from Helgoland and Locmariaquer were markedly stressed at Δ+6°C: occurrence of tissue necrosis, reduced Fv/Fm, and a significantly elevated de-epoxidation state of the xanthophyll cycle (DPS). The variations in phlorotannins, mannitol and tissue C and N contents were independent of temperature treatments and latitudinal distribution pattern. Pronounced site-specific variability in response to increasing temperatures implies that exceeding a threshold above the mean summer temperature exclusively affect rear-edge (southernmost) populations.Abiotic temperature data used in this manuscript were produced with the Giovanni online data system, developed and maintained by the NASA GES DISC. Sampling in France was conducted in accordance with the French legislation on the Access to Genetic Resources and Benefit-Sharing. We also acknowledge the MODIS mission scientists and associated NASA personnel for the production of the data used in this research effort. This study has been conducted at the Alfred Wegener Institute for Polar and Marine Research (AWI), Bremerhaven and at the AWIPEV Research Station in Ny-Ålesund, Svalbard. We are grateful to the station staff of AWIPEV for support and logistics and to the scientific diving teams on Spitsbergen and Helgoland for sampling. We thank A. Wagner (AWI) for sampling support on Helgoland and his support in the setting up of the experiments, and also J. Müller (University of Rostock) for running the C:N analyzer. B. Meyer-Schlosser (University of Bremen) supported sampling and pigment analyses.
- Linking thallus morphology with P-I curves of 50 macrobenthic algae from Bolinao, Pangasinan, PhilippinesSaco, Jayvee; Ganzon-Fortes, Edna (Science and Technology Information Institute, 2022-08-04)This study demonstrated that thallus morphology could affect a species' capacity to utilize light for photosynthesis and, hence, will affect its productivity. Fifty (50) macroalgal species collected from an intertidal habitat in Bolinao, Pangasinan, Philippines were grouped into five "functional-forms" based on their inferred productivity: functional-form group (FFG) A: very thin tubes/sheets/strips, FFG B: thin sheets/delicately branched, FFG C: medium-thick blade/coarsely branched with dense ramuli, FFG D: heavily thick branches/segments or with moderate calcification, and FFG E: heavily calcified. Their photosynthesis-irradiance (P-I) curves were determined through the measurement of oxygen evolved in a closed system after 1-h incubation under six different light treatments. P-I curve parameters such as P n max , I k , I c , α, and R d were assessed to determine the groups' physiological responses to light. The thickness of thallus blades, coarseness of branches, complex branching, and calcification appeared to lessen photosynthetic capacity, as shown by the significantly decreasing trend of P n max from FFGs A-E. FFG A also showed the steepest slope (highest mean α value) compared with the rest of the functional-form groups, indicating their efficiency to utilize low light for photosynthesis. Light saturation and compensation values were less distinct in differentiating the functional form groups, probably because the seaweeds examined were all collected from the same shallow intertidal zone, suggesting their acclimation to similar photon flux densities. Results from this study fit the prediction of the function form hypothesis for seaweeds quite well.Appreciation is extended to: [1] the Philippine Council for Aquatic, Agricultural, and Natural Resources Research and Development of the Department of Science and Technology as thesis grant to the first author; [2] the UP-CS-MSI research grant to the second author; [3] the Commission on Higher Education for the financial support; and [4] the staff of the Bolinao Marine Laboratory, UP-MSI, and the Batangas State University for their assistance. Helpful critics and recommendations from Dr. Rhodora Azanza and Dr. Wilfredo Uy are acknowledged, most especially to the late Dr. Ronald Villanueva, to whom this paper is wholeheartedly dedicated. Also, deep appreciation is extended to the reviewers for greatly improving the manuscript of this paper.
- Variability and potential of seaweeds as ingredients of ruminant diets: An in vitro studyde la Moneda, Ana; Carro, Maria Dolores; Weisbjerg, Martin R.; Roleda, Michael Y.; Lind, Vibeke; Novoa-Garrido, Margarita; Molina-Alcaide, Eduarda (MDPI AG, 2019-10-22)This study was designed to analyze the chemical composition and in vitro rumen fermentation of eight seaweed species (Brown: Alaria esculenta, Laminaria digitata, Pelvetia canaliculata, Saccharina latissima; Red: Mastocarpus stellatus, Palmaria palmata and Porphyra sp.; Green: Cladophora rupestris) collected in Norway during spring and autumn. Moreover, the in vitro ruminal fermentation of seventeen diets composed of 1:1 oat hay: concentrate, without (control diet) or including seaweeds was studied. The ash and N contents were greater (p < 0.001) in seaweeds collected during spring than in autumn, but autumn-seaweeds had greater total extractable polyphenols. Nitrogen in red and green seaweeds was greater than 2.20 and in brown seaweeds, it was lower than 1.92 g/kg DM. Degradability after 24 h of fermentation was greater in spring seaweeds than in autumn, with Palmaria palmata showing the greatest value and Pelvetia canaliculata the lowest. Seaweeds differed in their fermentation pattern, and autumn Alaria esculenta, Laminaria digitata, Saccharina latissima and Palmaria palmata were similar to high-starch feeds. The inclusion of seaweeds in the concentrate of a diet up to 200 g/kg concentrate produced only subtle effects on in vitro ruminal fermentation.
- Microscopic stages of North Atlantic Laminaria digitata (Phaeophyceae) exhibit trait-dependent thermal adaptation along latitudesSchimpf, Nele M.; Liesner, Daniel; Franke, Kiara; Roleda, Michael Y.; Bartsch, Inka (Frontiers Media SA, 2022-06-17)Kelp forests in the North Atlantic are at risk of decline at their warm temperature distribution margins due to anthropogenic temperature rise and more frequent marine heat waves. To investigate the thermal adaptation of the cold-temperate kelp Laminaria digitata, we sampled six populations, from the Arctic to Brittany (Spitsbergen, Tromsø, Bodø [all Norway], Helgoland [Germany], Roscoff and Quiberon [both France]), across the species’ entire distribution range, spanning 31.5° latitude and 12-13°C difference in mean summer sea surface temperature. We used pooled vegetative gametophytes derived from several sporophytes to approximate the genetic diversity of each location. Gametophytes were exposed to (sub-) lethal high (20-25°C) and (sub-) optimal low (0-15°C) temperature gradients in two full-factorial, common-garden experiments, subjecting subsets of populations from different origins to the same conditions. We assessed survival of gametophytes, their ability to develop microscopic sporophytes, and subsequent growth. We hypothesized that the thermal performance of gametophytes and microscopic sporophytes corresponds to their local long-term thermal history. Integrated gametophyte survival revealed a uniform upper survival temperature (UST) of 24°C among five tested populations (Tromsø to Quiberon). In contrast, following two weeks of thermal priming of gametophytes at 20-22°C, sporophyte formation at 15°C was significantly higher in southern populations (Quiberon and Roscoff) compared to the high-latitude population of Tromsø. Between 0-15°C, survival of the Arctic population (Spitsbergen) was negatively correlated with increasing temperatures, while the southern-most population (Quiberon) showed the opposite. Thus, responses of survival at low, and sporophyte formation at high temperatures, support the concept of local adaption. On the other hand, sporophyte formation between 0-15°C peaked at 6-9°C in the Quiberon and at 9-12°C in the Spitsbergen population. Sporophyte growth rates (GR) both in length and width were similar for Spitsbergen, Tromsø and Quiberon; all had maximum GRs at 12-15°C and low GRs at 0-6°C. Therefore, responses of sporophyte formation and growth at low temperatures do not reflect ecotypic adaptation. We conclude that L. digitata populations display trait-dependent adaptation, partly corresponding to their local temperature histories and partly manifesting uniform or unpredictable responses. This suggests differential selection pressures on the ontogenetic development of kelps such as L. digitata.We would like to thank A. Wagner for the sampling and clonal isolation of kelp material and technical assistance in the laboratory, C. Daniel for support with the image analysis, L. Foqueau for the SST data, C. Gauci for statistical advice and S. DeAmicis for supervision in this BSc Thesis.
- Expressed sequence tags (ESTs) from the marine red alga Gracilaria gracilisLluisma, Arturo O.; Ragan, Mark A. (Springer, 1997-06)Expressed sequence tags (ESTs) are partial sequences of cDNAs, and can be used to characterize gene expression in organisms or tissues. We have constructed a 200-sequence EST database from vegetative thalli of Gracilaria gracilis, the first ESTs reported from any alga. This database contains recognizable ESTs corresponding to genes of carbohydrate metabolism (seven), amino acid metabolism (three), photosynthesis (five), nucleic acid synthesis, repair and processing (three), protein synthesis (14), protein degradation (six), cellular maintenance and stress response (three), other identifiable protein-coding genes (13) and 146 sequences for which significant matches were not found in existing sequence databases. We have already used this EST database to recover genes of carbohydrate biosynthesis from G. gracilis.
- Seasonal variations in the yield, gelling properties, and chemical composition of agars from Gracilaria eucheumoides and Gelidiella acerosa (Rhodophyta) from the PhilippinesVillanueva, R. D.; Montaño, N. E.; Romero, J. B.; Aliganga, A. K. A.; Enriquez, E. P. (Walter de Gruyter GmbH, 1999-01-01)The yield, physical, and chemical properties of agars from two Philippine red seaweeds, Gracilaria eucheumoides and Gelidiella acerosa, were investigated on a bimonthly basis. The yield of agar from Gracilaria eucheumoides was at a maximum during the early rainy season (May, 29%) and at a minimum during the summer month of March (20%). In Gelidiella acerosa, a peak in agar yield was also recorded in May (21%), with generally higher yields recorded during the rainy than in the dry season. Agar gel strengths fluctuated from 225 to 430 g cm−2 and from 160 to 820 g cm−2 for Gracilaria eucheumoides and Gelidiella acerosa, respectively, and both agars exhibited strongest gels in July. Significant seasonal variations were observed in the gelling and melting temperatures of agar from Gracilaria eucheumoides, but not from Gelidiella acerosa. Sulphate content only varied slightly in agar samples from Gracilaria eucheumoides, while a higher sulphate content was found in Gelidiella acerosa agar during the dry season. Moreover, the sulphate content in G. acerosa agar fluctuated inversely with the 3,6-anhydrogalactose content. A FT-IR analysis showed a fairly constant spectrum for temporal Gracilaria eucheumoides agar while peaks attributed to S–O vibrations intensified in Gelidiella acerosa samples which were recorded to contain high sulphate residues and possess low gel strengths. Diagnosis of the FT-IR spectra in the 1000–400 cm−1 frequency range was also conducted in comparison with agarose and Gracilaria chilensis agar.
- Highly methylated agar from Gracilaria edulis (Gracilariales, Rhodophyta)Villanueva, Ronald; Montaño, Nemesio (Springer, 1999-04)The structure and gelling properties of alkali-modified agar from Gracilaria edulis were investigated. 1H and 13C NMR experiments revealed a basic repeating unit of alternating 3-linked 6- O-methyl-β-D-galactopyranose and 4-linked 3,6-anhydro-α-L-galactopyranose. Partial methylation at O-2 of the anhydrogalactose moiety was also revealed. Meanwhile, the O-4 of the methylated galactose residue was detected to exhibit partial sulfation by NMR and FT-IR spectroscopy. The gel strength and syneresis index of the extracted agar were considerably enhanced by the addition of sodium, potassium, and calcium ions. The ion-driven gelation and peculiar sulfate position conferred the agar's similarity to κ-carrageenan.
- Occurrence of closely spaced genes in the nuclear genome of the agarophyte Gracilaria gracilisLluisma, Arturo O.; Ragan, Mark A. (Springer, 1999)Little is known about the structure and organisation of nuclear genomes in red algae. In particular, it is not known whether genes are densely or loosely packed, whether gene order is conserved, whether their genes tend to occur in one or multiple copies and whether their nuclear genes tend to be compact or interrupted by numerous introns. Sequencing of cloned genomic DNA from Gracilaria gracilis has begun to provide provisional answers to some of these questions. Four pairs of closely spaced genes have been found in G. gracilis upon sequencing genomic clones that contain genes for UDPglucose pyrophosphorylase, galactose-1-phosphate uridylyltransferase, the β subunit of tryptophan synthetase, and methionine sulphoxide reductase (a fifth pair of closely spaced genes, encoding polyubiquitin and aconitase, was reported earlier). An open reading frame with significant similarity to another known gene occurs close (< 1.7 kbp) to each of these genes. In two pairs the intergenic region is less than 400 bp in length, and for these the location of the putative polyadenylation signals indicates that the gene transcripts, encoded on opposite strands, have overlapping (hence complementary) 3′ regions. These somewhat unexpected findings begin to establish a basis for genome-level characterisation of red algae.
- Enrichment of the protein content of the macroalgae Saccharina latissima and Palmaria palmataAasen, Inga Marie; Sandbakken, Ingrid S.; Toldnes, Bendik; Roleda, Michael Y.; Slizyte, Rasa (Elsevier, 2022-06)The large brown seaweeds (kelps) are potential sources of protein for animal feed. They have lower protein contents than most red and green algae, but due to potential for large-scale production, they may represent a significant future protein source. The impact of pH, temperature and polysaccharide-degrading enzymes on the solubility and extraction yields of protein from wet Saccharina latissima biomass was investigated. The protein solubility increased with increasing pH and reached maximum of 23% at pH 11, determined as total amino acids (TAA). The enzyme treatments increased the release of soluble compounds by 30–35%. The highest protein yield obtained was 19%, using a ratio of water to wet seaweed of 1:1 for extraction. Even if the yields can be increased by increasing the water amounts used for extraction, the majority of the protein would remain in the insoluble residue after separation. The strategy for production of a larger quantity of protein-enriched biomass was therefore to maintain the insoluble fraction as the product. A pilot scale production was carried out, also including the red algae Palmaria palmata. In total 750 kg S. latissima and 195 kg P. palmata were processed. The protein content in the product increased from 10 to 20% of dry weight (dw) for S. latissima and from 12 to 28% for P. palmata, with yields of 79 and 69%, respectively. The ash content was reduced from 44 to 26% and from 12 to 5% of dw, respectively, for the two species. The main protein loss was free amino acids, which constituted approximately 10% of TAA in the feedstocks. Less essential than non-essential amino acids were lost, thus, the essential amino acids were enriched in the product.The work was funded by The Research Council of Norway, grant no. 244244.
- Marine macroalgal reference culture collection at the University of the Philippines Marine Science Institute (UP-MMARCC): Status and prospects for advancing Philippine phycologySantiañez, Wilfred John E.; Guerta, Christian Ace T.; Lastimoso, John Michael L. (Assocation of Systematic Biologists in the Philippines, 2022-11-16)Seaweeds research in the Philippines-from studies on their diversity, natural products chemistry, and the utilization of their derivatives-is largely based on spot collections of large and conspicuous components of the seaweed flora found along the coasts. Such efforts are often focused on commercially important seaweeds; thus, most of the smaller and even microscopic seaweeds remain understudied, if not completely overlooked. Consequently, little to none is known on many aspects of the biology, ecology, and even biochemistry of these components of the Philippine seaweed flora. To understand aspects of seaweed biology and serve as a facility for preserving the genetic resources of Philippine seaweeds, we established the Marine Macroalgal Reference Culture Collection at the University of the Philippines Marine Science Institute (UP-MMARCC). We are currently maintaining 446 seaweed strains (or isolates) collected from several coastal and offshore areas in the Philippines, the latter including the Kalayaan Island Group in the West Philippine Sea, and 25 isolates from Okinawa, Japan. To our knowledge, the UP-MMARCC is the most diverse and widely sampled culture collection in the Philippines so far. Moreover, our preliminary molecular-assisted biodiversity studies suggest that UP-MMARCC houses several isolates that are either new records to the Philippines or putative new taxa. We anticipate that with continued support, we will be able to sustain and expand our culture collection, not only to facilitate discoveries but also to cater to the needs of the Philippine seaweed industry and in support of its call for diversifying our seaweed commodities and their products.