Challenge 04: Develop a sustainable and equitable ocean economy
Permanent URI for this collectionhttps://repository.unesco.gov.ph/handle/123456789/23
Ocean Decade
Challenge 04:
Develop a sustainable and equitable ocean economy
Generate knowledge, support innovation and multi-sectoral partnerships and develop solutions for equitable, resilient and sustainable development of the ocean economy under changing environmental, social and climate conditions.
Browse
3 results
Search Results
- Local tide and geoid corrections significantly improve coastal retracked Jason sea surface heights in the PhilippinesFlores, Paul Caesar; Reyes, Rosalie; Amedo-Repollo, Charina Lyn; Rediang, Abegail; Alfante, Rey Mark; Bauzon, Ma. Divina Angela; Pasaje, Nikki; Bringas, Dennis (Science and Technology Information Institute, 2022-11-08)Retracking algorithms increase the accuracy of coastal sea surface height (SSH) measurements. However, it is still important to validate these retracking estimates with tide gauge (SSHtg) observations. We downloaded the freely available Jason altimeter SSH processed using the XTRACK-ALES algorithm, then detided the SSH using different tide models. The first model is the default tidal correction based on Finite Element Solution 2014 (SSHfes), and the second model is the T_Tide harmonic analysis of the nearest tide gauge (SSHaltimeter). SSHfes showed a very poor correlation (< 0.31) and very high root mean square error (RMSE, > 29 cm). In contrast, SSHaltimeter generally showed a very high correlation (> 0.91) and low RMSE (< 17.4 cm). A further quality check based on the average and standard deviation of the difference between the SSH readings (SSHfes – SSHtg and SSHaltimeter – SSHtg) also showed the superior performance of SSHaltimeter,which scored < 9.3 and < 16.5 cm, respectively; compared to SSHfes, which scored < 9.3 cm and > 27 cm for the same parameters. The poor performance from the SSHfes likely comes from the complex bathymetry and coastal geomorphology of the country, which is not accounted for in the FES. The Philippines generally has a narrow shelf, and the FES tide corrections may be related to deep-water tides rather than the shallow-water tides observed from tide gauges. Despite the high correlation and agreement between the SSHaltimeter and SSHtg, the rate of sea level rise from the SSHaltimeter in some sites is more than twice the rate from SSHtg, which indicates the possible influence of the vertical land movement.This study was supported by grants to R.B. Reyes by the Department of Science and Technology–Philippine Council for Industry, Energy, and Emerging Technology Research and Development through the Coastal Sea Level Rise Philippines Project. We also thank the anonymous reviewers for their feedback on how to improve the manuscript.
- Ocean mapping and other marine activities of the National Mapping and Resource Information Authority (NAMRIA)Carandang, Efren P. (Philippine Council for Aquatic and Marine Research and Development, 2002)This paper describes the various marine activities being undertaken by the National Mapping and Resource Information Authority (NAMRIA) pursuant to its mandate as the central surveying, mapping and resource information agency of the government. NAMRIA gathers marine data through periodic hydrographic and oceanographic surveys and remote sensing techniques, and publishes the results in the form of nautical charts, bathymetric maps and other thematic maps. It also creates marine geographic information systems and databases. As steward of the National Oceanographic Data Center (NODC), the agency participates in international oceanographic data exchange programs, and also serves the marine data and information needs of the local marine science community. NAMRIA's data collection capability got a big boost with the acquisition this year of two multi-disciplinary survey vessels with state-of-the-art systems. With these vessels as platforms, NAMRIA will embark on the comprehensive charting of the Exclusive Economic Zone, and collaborate with the different marine science agencies in the conduct of multi-disciplinary oceanographic cruises.
- Genome mining of a novel marine sponge symbiont Nocardia sp. BML-15-R-026U reveals high biosynthetic potential for secondary metabolites, including a non-ribosomal peptide and a polyketide of high noveltyGloria, Paul Christian; Romines, Elaine; Punzalan, Marc Jeremie; Florece, Christine Marie; Cadorna, Kreighton; Salvador-Reyes, Lilibeth; Lluisma, Arturo (Philippine-American Academy of Science and Engineering, 2023-11-28)Antibiotic and drug resistance poses serious global public health threats, leading to substantial infections and fatalities annually. Addressing these issues requires the discovery of novel bioactive compounds and a faster and more cost-effective discovery process. However, traditional approaches, which require isolation and multi-step purification of compounds from organisms and running of initial assays, suffer from serious limitations such as the need for substantial amounts of biological material and high rates of compound rediscoveries. Because the biosynthetic capabilities of organisms are encoded in their genomes, genome mining provides a promising solution that would complement traditional approaches. This study conducted long-read whole genome sequencing on a marine sponge symbiont, Nocardia sp. BML-15-R-026U, to explore its genomic repertoire of secondary metabolite-encoding Biosynthetic Gene Clusters (BGCs). A four-contig genome assembly was generated for this isolate with a high degree of completeness and an estimated genome size of 4.84 Mbp. Its genome displays remarkable biosynthetic potential by containing at least 34 distinct secondary metabolite BGCs, predominantly Non-Ribosomal Peptide Synthetase (NRPS) and Polyketide Synthase (PKS) systems capable of producing novel chemical structures. Further analysis was focused on two genomic regions. In region 3.10, the study predicted a BGC for a novel, serine-rich non-ribosomal peptide with a predicted molecular weight of 2754 g/mol. Region 3.12 contained an iterative type-I PKS BGC, suggesting the potential synthesis of a polyketide compound with oxidoreductase-inhibiting properties. This study highlights genome mining as a productive early-phase approach for identifying promising drug leads and has identified the most promising candidates among this isolate’s BGCs for experimental validation.The study was funded by the Philippine Council for Health Research and Development – Department of Science and Technology under the “Anti-infective and Anticancer Drug Candidates from Marine Microorganisms and Sponges: Discovery and Development” project, Marine Science Institute – UP Diliman. The authors would like to thank the researchers of the Marine Genomics and Molecular Genetics Laboratory, MSI. The authors would also like to thank the researchers of the Discovery and Development of Health Products – Marine Component Phase I and researchers of the Marine Pharmacognosy Laboratory for the collection and initial analysis of the sample used in this study and storage and maintenance of the bacterial cultures. Sample collection was done under Gratuitous Permit No. GP-0084-15.