00. Ocean Decade - Philippines
Permanent URI for this communityhttps://repository.unesco.gov.ph/handle/123456789/7
The UNACOM Online and Digital Enabling Library and Index is developed to support the alignment of research, investments, and community initiatives toward contributing to a well-functioning, productive, resilient, sustainable, and inspiring ocean. The goal is to enable the government, partner agencies, and UNESCO to develop more robust Science-Informed Policies and facilitate a stronger Science-Policy Interface through the gathered data, information, and knowledge related to the Ocean Decade in the Philippines.
Particularly, it aims to:
Particularly, it aims to:
- Gather and index all publications, reports, policies, laws, legislations, articles, and other documents of the Philippine National Committee on Marine Sciences (NCMS) related to the Ocean Decade.
- Disseminate and promote these publications, reports, policies, and other documents on the initiatives and actions to address the Ocean Decade challenges.
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- Manzaea minuta gen. & comb. nov. (Scytosiphonaceae, Phaeophyceae) from the tropical Northwestern Pacific OceanSantiañez, Wilfred John E.; Kogame, Kazuhiro (Philippine Journal of Systematic Biology, 2022-07-11)Recent molecular-assisted taxonomic studies on the brown algal genus Hydroclathrus has resulted in discoveries of new taxa in the family Scytosiphonaceae, both at the genus and species level. However, phylogenetic studies on Hydroclathrus based on wide geographical sampling also suggested that the genus is not monophyletic. That is, one of the recently described species Hydroclathrus minutus is consistently segregated from the Hydroclathrus main clade. We propose here to segregate H. minutus from the brown algal genus Hydroclathrus and establish the new monotypic genus Manzaea (i.e., Manzaea minuta gen. & comb. nov.) based on information on molecular phylogenetics and morpho-anatomy. Morphologically, M. minuta is similar to Hydroclathrus and Tronoella in having clathrate (net-like) and spreading thalli but is differentiated from the latter two genera in having membranous thalli that are sometimes interadhesive resulting in portions of the thallus forming amorphous clumps. Additionally, Manzaea is distinguished from both clathrate genera in having thick-walled medullary cells and short closely arranged quadriseriate plurangia. Phylogenetic analyses (Maximum Likelihood and Bayesian Inference) based on single (plastidial psaA and rbcL genes) and concatenated (cox3 + psaA + rbcL) genes showed that M. minuta is consistently segregated from the highly supported clade of Hydroclathrus species and often clustering with Tronoella and/or Rosenvingea. Our proposal further increases the diversity of monotypic genera in the Scytosiphonaceae and underscores the need to conduct further studies on tropical seaweed biodiversity.WJES thanks Dr. Gavino C. Trono, Jr. and Dr. Edna T. Ganzon-Fortes for the inspiration and encouragement to conduct seaweed biodiversity and systematics research. WJES is funded by the University of the Philippines through the Balik PhD Program of the Office of the Vice President for Academic Affairs (OVPAA-BPhD-2018-05), the University of the Philippines Diliman through the In-house research grant of the Marine Science Institute, and the Ministry of Education, Culture, Sports, Science and Technology (MEXT) of the Government of Japan under the Monbukagakusho Scholarship Grant. WJES also acknowledges the support of the Department of Science and Technology (DOST)-Philippine Council for Agriculture, Aquatic and Natural Resources Research and Development (PCAARRD) of the Government of the Philippines through the DOST Balik Scientist Program.
- The complete mitochondrial genome of a wild-collected Kappaphycus malesianus (Solieriaceae, Rhodophyta)Crisostomo, Bea A.; Dumilag, Richard V.; Roleda, Michael Y.; Lluisma, Arturo O. (Taylor & Francis, 2023-03-04)Kappaphycus malesianus is a red seaweed farmed primarily for its carrageenan, a polysaccharide important in the food and pharmaceutical industries. Among the commercially cultivated Kappaphycus species, only K. malesianus has no mitogenome data available. Here, we assembled the mitochondrial genome of K. malesianus from next-generation sequencing data. The circular mitogenome consisted of 25,250 base pairs (bp) with a GC content of 30.25%. These values were comparable to previously sequenced solieriacean mitogenomes. Structural features, such as the stem-loop and hairpin, which were previously reported in other rhodophytes mitochondrial DNA, were also identified. The annotated genes (24 protein-coding genes, 24 tRNA genes, and 2 rRNA genes) were arranged in an order similar to the other available solieriacean mitogenomes. Lastly, phylogenetic analysis using 23 predicted protein domains showed the sister relationship of K. malesianus with other Kappaphycus species.The authors are grateful to Z.-Z. Aguinaldo, S. Damsik, and J. Turong for aiding during laboratory and field works. The authors also acknowledge the LGU of Sitangkai, Tawi-Tawi for granting permission for the collection activities. This is contribution no. 495 from the University of the Philippines the Marine Science Institute (UPMSI), Diliman, Quezon City.
- Sargassum sp. juice as an early juvenile supplemental feed for Stichopus cf. horrensIbañez, Glaiza; Cabanayan-Soy, Rona; Baure, Jerwin; Juinio-Meñez, Marie Antonette (Springer, 2022-09-28)The development of an efficient and low-cost feed is important to reduce the production and maintenance costs of microalgae. In this study, two experiments were conducted to evaluate the feasibility of using Sargassum sp. juice (SARG) to boost the growth and survival of post-settled Stichopus cf. horrens juveniles. Experiment 1 tested whether SARG improves growth compared with live microalgae diets, Chaetoceros calcitrans (Cc), combined Cc and Navicula ramosissima (Nr), and an unfed treatment. Experiment 2 determined the best SARG concentration—high feeding regime (HFR; 1 mL ind−1), medium (MFR; 0.5 mL ind−1), or low (LFR; 0.25 ml ind−1), relative to live microalgae Chaetoceros muelleri (CM). Juveniles in both experiments were reared for 30 days. In Experiment 1, the average daily growth rate (DGRL) of juveniles in SARG (0.04 ± 0.01 cm d−1) was the highest although not significantly different from Cc and Cc + Nr, but was significantly higher than the control. In Experiment 2, DGRL at day 14 in HFR (− 0.02 ± 0.02 cm d−1) was significantly lower than LFR (0.01 ± 0.01 cm d−1) and MFR (0.02 ± 0.02 cm d−1). Survival was higher in all SARG treatments compared with CM, while a significant decrease in feeding activity was observed in HFR by day 30. Results indicate that concentrations of 0.25–0.5 mL SARG per juvenile can boost growth and be an alternate diet for post-settled juveniles during early rearing. However, SARG alone is not sufficient to maintain growth beyond 3 weeks. With SARG feed supplementation and water quality management, the scaling-up of juvenile production of this emergent culture species can be accelerated.Our sincere gratitude to Mr. Tirso Catbagan and Mr. Garry Bucol for their assistance in the set-up of the experiments. We also thank Ms. Rose Angeli Rioja and Ms. JayR Gorospe for providing inputs to improve this paper. We also thank the Sea cucumber Research Team and the staff of the University of the Philippines—Marine Science Institute, Bolinao Marine Laboratory for their support and assistance during the conduct of the study.
- Genetic diversity of Kappaphycus malesianus (Solieriaceae, Rhodophyta) from the PhilippinesDumilag, Richard V.; Crisostomo, Bea A.; Aguinaldo, Zae-Zae A.; Lluisma, Arturo O.; Gachon, Claire M.M.; Roleda, Michael Y. (Elsevier, 2023-07)Kappaphycus farming for carrageenan production is characterized by a strong selective pressure at the genetic level. Traits of agronomic importance are compromised due to domestication bottlenecks and the subsequent events of possible selective breeding of founding cultivars. Kappaphycus malesianus is farmed in Malaysia and the Philippines, and is distributed within the Malesian region. While the majority of genetically characterized specimens of this species are from Malaysia, those from the Philippines are poorly explored. Here, we assessed the genetic diversity of K. malesianus from the Philippines based on cox1 sequences. Of the 15 identified haplotypes, 14 specimens represent three novel haplotypes (wild specimens) that form a group distinct from the main clade comprising most K. malesianus haplotypes known to date. An additional haplotype from a cultivated specimen was identical to that of the most widely distributed haplotype. Our findings demonstrate that the K. malesianus is genetically more diverse than previously recognized. It is expected that higher genetic diversity may be revealed through additional sampling from a wider geographic range and careful application of integrative approaches. Future selective breeding programs in Kappaphycus would benefit from the incorporation of the genetic resources, as provided in this study.
- Molecular-assisted taxonomic study on the Sargassum C.Agardh (Fucales, Phaeophyceae) in Northwestern Luzon, PhilippinesSantiañez, Wilfred John E.; Lastimoso, John Michael L.; Hoshino, Masakazu; Villafuerte, Brix Nester Q.; Kogame, Kazuhiro; Trono, Gavino C. (Museum National d'Histoire Naturelle, 2023-10-18)The diversity of the brown algal genus Sargassum C.Agardh in the Philippines is the highest in the tropical western Pacific Ocean. However, most studies on Philippine Sargassum are based on morphoanatomies and the assumption that the genus is very diverse in the country has never been tested based on molecular information. Considering that many Sargassum species are highly polymorphic and the recent advance on Sargassum systematics facilitated by molecular phylogenetic studies, we believe that the species of Sargassum from the Philippines should now be reassessed with the tools of molecular taxonomy. We present here the results of our molecular-assisted taxonomic studies on the Sargassum of the northern Philippines, particularly along the coasts of four coastal provinces in northwestern Luzon (i.e., Ilocos Norte, Ilocos Sur, La Union, and Pangasinan). We recognized three distinct species lineages, namely, Sargassum aquifolium (Turner) C.Agardh, Sargassum ilicifolium (Turner) C.Agardh, and Sargassum polycystum C.Agardh based on our molecular analyses of 74 specimens from our study areas. Our morphological observations on the range of characters of these species also suggest that several common Sargassum taxa in the Philippines have been misidentified. Particularly, specimens previously attributed to S. kushimotense Yendo should be referred as S. aquifolium while the widely distributed and highly plastic S. ilicifolium is often confused and identified in the Philippines under several names including S. crassifolium J.Agardh, S. cristaefolium C.Agardh, and S. turbinarioides Grunow. Taken together, our results suggest that Sargassum biodiversity in the Philippines may have been inflated by misidentifications, and, that species diversity is actually much lower than initially thought.
- Trans-Arctic asymmetries, melting pots and weak species cohesion in the low-dispersal amphiboreal seaweed Fucus distichusNeiva, João; Assis, Jorge; Fragkopoulou, Eliza; Pearson, Gareth A.; Raimondi, Peter T.; Anderson, Laura; Krause-Jensen, Dorte; Marbà, Núria; Want, Andrew; Selivanova, Olga; Nakaoka, Masahiro; Grant, W. Stewart; Konar, Brenda; Roleda, Michael Y.; Sejr, Mikael K.; Paulino, Cristina; Serrão, Ester A. (Frontiers Media SA, 2024-04-18)Amphiboreal taxa are often composed of vicariant phylogroups and species complexes whose divergence and phylogeographic affinities reflect a shared history of chronic isolation and episodic trans-Arctic dispersal. Ecological filters and shifting selective pressures may also promote selective sweeps, niche shifts and ecological speciation during colonization, but these are seldom considered at biogeographical scales. Here we integrate genetic data and Ecologic Niche Models (ENMs) to investigate the historical biogeography and cohesion of the polymorphic rockweed Fucus distichus throughout its immense amphiboreal range, focusing on trans-Arctic asymmetries, glacial/interglacial dynamics, and integrity of sympatric eco-morphotypes. Populations were sampled throughout the Pacific and the Atlantic, from southern rear-edges to the high-Arctic. They were genotyped for seven microsatellites and an mtDNA spacer, and genetic diversity and structure were assessed from global to local scales. ENMs were used to compare niche divergence and magnitude of post-glacial range shifts in Pacific versus Atlantic sub-ranges. Haplotypic and genotypic data revealed distinct and seemingly isolated Pacific vs Arctic/Atlantic gene-pools, with finer-scale regional sub-structuring pervasive in the Pacific. MtDNA diversity was highly structured and overwhelmingly concentrated in the Pacific. Regionally, Alaska showed the highest intra-population diversity but the lowest levels of endemism. Some sympatric/parapatric ecotypes exhibited distinct genotypic/haplotypic compositions. Strikingly, niche models revealed higher Pacific tolerance to maximum temperatures and predicted a much more consolidated presence in the NE Atlantic. Glacial and modern ranges overlapped extensively in the Pacific, whereas the modern Atlantic range was largely glaciated or emerged during the Last Glacial Maximum. Higher genetic and ecogeographic diversity supports a primary Pacific diversification and secondary Atlantic colonization, also likely reflecting the much larger and more stable climatic refugia in the Pacific. The relic distribution and reduced ecological/morphological plasticity in the NE Atlantic are hypothesized to reflect functional trans-Arctic bottlenecks, recent colonization or competition with congeners. Within the Pacific, Alaska showed signatures of a post-glacial melting pot of eastern and southern populations. Genetic/ecotypic variation was generally not sufficiently discontinuous or consistent to justify recognizing multiple taxonomic entities, but support a separate species in the eastern Pacific, at the southern rear-edge. We predict that layered patterns of phylogeographic structure, incipient speciation and niche differences might be common among widespread low-dispersal amphiboreal taxa.The authors thank Marta Valente (CCMAR), André Silva and Diogo Brito for sequencing and genotyping work and all the people involved in sample collection. Samples from Logy Bay were kindly collected by Kyle R. Millar. DK-J and NM thank Hurtigruten’s FRAM cruise for help with sampling along the Greenland west coast. Greenland sampling was also connected with campaigns for the MarineBasis component of the Greenland Ecosystem Monitoring (GEM) Programme in Nuuk and Young Sound, which is acknowledged.
- Seaweed as a resilient food solution after a nuclear warJehn, Florian Ulrich; Dingal, Farrah Jasmine; Mill, Aron; Harrison, Cheryl; Ilin, Ekaterina; Roleda, Michael Y.; James, Scott C.; Denkenberger, David (American Geophysical Union, 2024-01-09)Abrupt sunlight reduction scenarios such as a nuclear winter caused by the burning of cities in a nuclear war, an asteroid/comet impact or an eruption of a large volcano inject large amounts of particles in the atmosphere, which limit sunlight. This could decimate agriculture as it is practiced today. We therefore need resilient food sources for such an event. One promising candidate is seaweed, as it can grow quickly in a wide range of environmental conditions. To explore the feasibility of seaweed after nuclear war, we simulate the growth of seaweed on a global scale using an empirical model based on Gracilaria tikvahiae forced by nuclear winter climate simulations. We assess how quickly global seaweed production could be scaled to provide a significant fraction of global food demand. We find seaweed can be grown in tropical oceans, even after nuclear war. The simulated growth is high enough to allow a scale up to an equivalent of 45% of the global human food demand (spread among food, animal feed, and biofuels) in around 9–14 months, while only using a small fraction of the global ocean area. The main limiting factor being the speed at which new seaweed farms can be built. The results also show that the growth of seaweed increases with the severity of the nuclear war, as more nutrients become available due to increased vertical mixing. This means that seaweed has the potential to be a viable resilient food source for abrupt sunlight reduction scenarios.
- Physiological and biochemical characterization of new wild strains of Kappaphycus alvarezii (Gigartinales, Rhodophyta) cultivated under land-based hatchery conditionsNarvarte, Bienson Ceasar V.; Hinaloc, Lourie Ann R.; Genovia, Tom Gerald T.; Gonzaga, Shienna Mae C.; Tabonda-Nabor, April Mae; Roleda, Michael Y. (Elsevier, 2022-12)The red alga Kappaphycus alvarezii is globally cultivated as a major source of k-carrageenan. Farming of this species through clonal propagation has been confined to a few good-quality commercial strains. After more than 50 years of successful cultivation and high productivity, the production of K. alvarezii in most “cottonii”-producing countries like the Philippines had declined in recent decades. This can be attributed to low genetic variability, making “old” cultivars more susceptible to environmental stressors, pests (epi- and endophytes) and diseases (e.g., ice-ice). Hence, the establishment of new cultivars from wild strains with desirable traits may provide alternative seedstocks with different genetic makeup from the currently farmed cultivars. Here, we examined the physiological and biochemical properties of 10 new wild strains of K. alvarezii, belonging to four non-commercially cultivated haplotypes, collected from Eastern Samar, Philippines. These strains were cultivated in an outdoor, land-based hatchery with ambient light and flow-through, nutrient replete seawater. Growth rates, ranging from 0.44 % to 3.74 % d-1, significantly varied among the strains but did not significantly vary among haplotypes. The cultivars also showed a notable change in color and morphology as they adapted to hatchery conditions. Pigments and total phenolic content did not significantly vary among cultivars. Proximate analysis showed that the dry biomass of all K. alvarezii strains was composed mainly of ash (ranging from 39.2 % to 51.0 %), followed by carbohydrate (ranging from 26.0 % to 35.3 %), and with trace amounts of proteins (ranging from 1.02 % to 4.61 %). Moreover, tissue stoichiometry (C, N and P) was comparable among the 10 strains. Considering the promising growth performance of strain SamW-014 under hatchery condition, we recommend its cultivation at sea and conduct corresponding carrageenan yield and quality analyses on its raw dried biomass. Among the 10 strains, five others are also of interest and for consideration. Thereafter, selected strain(s) will be introduced to seaweed farmers for future cultivation to increase biomass production, harvest yields, and income.This is contribution no. 492 from the University of the Philippines- the Marine Science Institute (UPMSI), Diliman, Quezon City. We thank the BFAR 8 Regional Director Juan D. Albaladejo, Vicenta Z. Projimo, and the staff for their hospitality in facilitating the collection of wild Kappaphycus samples in Guiuan, Eastern Samar, and the Bolinao Marine Laboratory (BML) and the Marine Biogeochemistry Laboratory of UPMSI for providing a venue to conduct hatchery and laboratory experiments. We also thank Guillermo Valenzuela and Jerry Arboleda for maintaining our cultures at the BML hatchery. MYR acknowledges the Philippines Department of Science and Technology (DOST) Balik Scientist Program (BSP) fellowship.