National Committee on Marine Sciences (NCMS)
Permanent URI for this communityhttps://repository.unesco.gov.ph/handle/123456789/6
Browse
2 results
Search Results
- Detection of horizontal gene transfer in the genome of the choanoflagellate Salpingoeca rosettaMatriano, Danielle M.; Alegado, Rosanna A.; Conaco, Cecilia (Springer, 2021-03-16)Horizontal gene transfer (HGT), the movement of heritable materials between distantly related organisms, is crucial in eukaryotic evolution. However, the scale of HGT in choanoflagellates, the closest unicellular relatives of metazoans, and its possible roles in the evolution of animal multicellularity remains unexplored. We identified at least 175 candidate HGTs in the genome of the colonial choanoflagellate Salpingoeca rosetta using sequence-based tests. The majority of these were orthologous to genes in bacterial and microalgal lineages, yet displayed genomic features consistent with the rest of the S. rosetta genome—evidence of ancient acquisition events. Putative functions include enzymes involved in amino acid and carbohydrate metabolism, cell signaling, and the synthesis of extracellular matrix components. Functions of candidate HGTs may have contributed to the ability of choanoflagellates to assimilate novel metabolites, thereby supporting adaptation, survival in diverse ecological niches, and response to external cues that are possibly critical in the evolution of multicellularity in choanoflagellates.We thank Joshua Dizon and Francis Tablizo of the Philippine Genome Center Core Facility for Bioinformatics for assistance with scripts and database construction. We thank Becca Lensing (University of Hawai’i), Cheryl Andam (University of New Hampshire), Deo Onda and Ron Leonard Dy (University of the Philippines) for insightful comments and suggestions on the analysis and interpretation of the data. This work was supported by thesis grants from the Department of Science and Technology Accelerated Science and Technology Human Resource Development Program-National Science Consortium (DOST-ASTHRDP-NSC) and the University of the Philippines Marine Science Institute to DM.
- Ontogenetic variability in the diel activity pattern of the marine gastropod Cassis cornuta(Mollusca: Cassidae)Calle, Lala Grace; Cabaitan, Patrick C; Sayco, Sherry Lyn G; Tan, Shau Hwai; Conaco, Cecilia (Oxford University Press, 2024-01-25)Examining activity patterns is essential in understanding gastropod feeding and movement ecology. However, the diel activity patterns of large-bodied gastropods, such as Cassis cornuta, remain poorly studied. Here, we conducted outdoor hatchery-based experiments to examine the diel activity patterns of C. cornuta adults and juveniles under natural sunlight and photoperiod. Activities of C. cornuta, such as crawling, hunting, feeding, burrowing and resting on the substratum, were examined every hour for 3 days. Although most individuals were inactive for a greater part of the observation period, active behaviours were recorded for some individuals during both daytime and nighttime, suggesting that C. cornuta is cathemeral, as supported by a nonsignificant result from a Rayleigh's test of uniformity. A higher proportion of adult and juvenile C. cornuta were inactive, either burrowed or resting on the substratum, during the 24-h period. Peak activity time for juveniles started at 20:00, with up to 50% of individuals active, while peak activity time for adults started at 21:00, with up to 20% of active individuals. Adults spent more time resting aboveground, whereas juveniles spent more time burrowed under the sand when not feeding. Juveniles hunted more frequently and spent more time feeding compared to adults. Additionally, juveniles crawled faster and were more successful in capturing sea urchins than adults. The information on variability in the diel activity patterns and movement rates between adult and juvenile C. cornuta would allow further demographic studies, and provide insights into possible conservation strategies for this species.