National Committee on Marine Sciences (NCMS)
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- Insights into the environmental conditions contributing to variability in the larval recruitment of the tropical sardine Sardinella lemuruPata, Patrick R.; Yñiguez, Aletta T.; Deauna, Josephine Dianne L.; De Guzman, Asuncion B.; Jimenez, Cesaria R.; Rosario, Roselle T. Borja-Del; Villanoy, Cesar L. (Elsevier, 2021-07)The small pelagic fishery in the southern Philippines is one of the largest contributors to fisheries production in the country, and is dominated by the Bali sardine Sardinella lemuru. This species is a year-round spawner that has its peak spawning period during the northeast monsoon (NEM) months of November to February. However, there is still limited information on the conditions that affect this species’ survival during its early life history stages. Here, we attempt to discern the importance of temperature, prey density and advection on sardine larvae. The larvae were represented as passive particles that were released in known spawning grounds to simulate dispersal. The conditions the larvae experienced, namely, temperature and estimated prey density based on satellite chlorophyll-a values were recorded at each time step until the estimated recruitment age of 60 days. The temporal and spatial averaged conditions of recruited sardines showed that sardines spawned during the NEM months experienced higher chlorophyll-a, lower (more optimal) sea surface temperature, albeit higher advective loss, than sardines spawned during other months. Comparisons between years showed that during higher reported catch years, sardine larvae experienced lower temperatures and higher retention nearshore. Our results emphasize that sardine stock management efforts need to recognize the contribution of the temporally variable sardine environment to patterns in sardine recruitment and consequently in catches.The authors would like to thank Dr. Wilfredo Campos, Luke Felix, Dr. Rio Naguit, Denmark Recamara, and the Research for Sardines Volunteer Program (RSVP) volunteers for sharing sardine fisheries data; Arjay Cayetano for helping start the model used; and Iris Salud Bollozos for useful insights on larval ecology. This study was fully funded by the Department of Science and Technology–Philippine Council for Agriculture, Aquatic and Natural Resources Research and Development (DOSTPCAARRD) under the program, “Development of robust tools for managing sardine fisheries in the Philippines: Zamboanga Upwelling Bohol Sea System Program.” The authors declare no conflict of interest.
- Restriction site-associated DNA sequencing reveals local adaptation despite high levels of gene flow in Sardinella lemuru (Bleeker, 1853) along the northern coast of Mindanao, PhilippinesLabrador, Kevin; Palermo, Joseph Dominic; Agmata, Altair; Ravago-Gotanco, Rachel; Pante, Ma. Josefa (Frontiers Media SA, 2022-02-24)Stock identification and delineation are important in the management and conservation of marine resources. These were highlighted as priority research areas for Bali sardinella (Sardinella lemuru) which is among the most commercially important fishery resources in the Philippines. Previous studies have already assessed the stocks of S. lemuru between Northern Mindanao Region (NMR) and Northern Zamboanga Peninsula (NZP), yielding conflicting results. Phenotypic variation suggests distinct stocks between the two regions, while mitochondrial DNA did not detect evidence of genetic differentiation for this high gene flow species. This paper tested the hypothesis of regional structuring using genome-wide single nucleotide polymorphisms (SNPs) acquired through restriction site-associated DNA sequencing (RADseq). We examined patterns of population genomic structure using a full panel of 3,573 loci, which was then partitioned into a neutral panel of 3,348 loci and an outlier panel of 31 loci. Similar inferences were obtained from the full and neutral panels, which were contrary to the inferences from the outlier panel. While the full and neutral panels suggested a panmictic population (global FST ∼ 0, p > 0.05), the outlier panel revealed genetic differentiation between the two regions (global FST = 0.161, p = 0.001; FCT = 0.263, p < 0.05). This indicated that while gene flow is apparent, selective forces due to environmental heterogeneity between the two regions play a role in maintaining adaptive variation. Annotation of the outlier loci returned five genes that were mostly involved in organismal development. Meanwhile, three unannotated loci had allele frequencies that correlated with sea surface temperature. Overall, our results provided support for local adaptation despite high levels of gene flow in S. lemuru. Management therefore should not only focus on demographic parameters (e.g., stock size and catch volume), but also consider the preservation of adaptive variation.We would like to acknowledge the assistance provided by Ma. Rio Naguit, Asuncion De Guzman, Jerry Garcia, Jhunrey Follante, Joshep Mercene, and John Christopher Azcarraga in sample collection and initial processing. We also acknowledge the research staff of the Marine Molecular Ecology and Evolution Laboratory (MMEEL), as well as the Marine Genomics and Molecular Genetics Laboratory (MGMGL) and its head, Arturo Lluisma, for providing valuable input in the conduct of the experiment and analysis of the data. Finally, we extend our gratitude to Demian Willette, Laura David, and Jonas Quilang for their valuable feedback on the manuscript.