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National Committee on Marine Sciences (NCMS)

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    Genetic diversity and population connectivity of the greenblotch parrotfish (Scarus quoyi Valenciennes, 1840) within southern Mindanao inferred from mitochondrial 16S rRNA
    Labrador, Kevin; Fortaleza, Maybelle; Cabasan, Joey; Elumba, Merlene; Nañola, Cleto (Science and Technology Information Institute, 2022-10-03)
    A genetic assessment was done on the greenblotch parrotfish (Scarus quoyi Valenciennes, 1840) in three bays within southern Mindanao, Philippines. Mitochondrial 16S rRNA recovered 12 haplotypes, one of which was dominant in all sites. Despite the reported phenotypic variation from previous assessments, there was neither evidence of genetic structure (global Φst = 0.012, p = 0.13) nor isolation by distance (r = 0.05, p = 0.50). Genetic diversity was also low (Hglobal = 0.472; πglobal = 0.13%), with ~ 77% of haplotype diversity accounted for with just 69 samples. While connectivity suggests continuous larval exchange within southern Mindanao owing to the species’ high dispersal potential, low genetic diversity implies reduced effective population size, probably due to recent bottlenecks (e.g. overfishing, habitat destruction). Although this study provides baseline genetic information on the local population, inferences are considerably limited by the genetic marker used and the spatial scale under investigation. A thorough understanding of the population will be possible if the entire habitat range of the species is assessed using markers with high resolving power, such as the hypervariable mitochondrial control region, microsatellites, or genome-wide single nucleotide polymorphisms (SNPs).
    This project was funded by the DOST-PCAARRD (Department of Science and Technology–Philippine Council for Agriculture, Aquatic, and Natural Resources Research and Development) through the projects titled “DNA Barcoding and Genetic Diversity of Selected Marine Fishes along the North Bifurcation of the North Equatorial Current (NEC)” and “DNA Barcoding of Selected Marine Fishes in Davao and Sulu Archipelago (MINDA).” Sample collection was covered by the DARETO (Discovery-Applied Research and Extension for Trans/Inter-disciplinary Opportunities) research grant under CHED (Commission on Higher Education) through the project entitled “Bioeconomic Assessment and Modelling of Reef Fisheries and Sustainable Harvest Project”. We would like to thank Junissa M. Consuegra, Joemarie J. Lanutan, and Jodi Eugenia Lourdes F. del Fierro for their assistance in sample collection and laboratory work.
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    Physiological and biochemical characterization of new wild strains of Kappaphycus alvarezii (Gigartinales, Rhodophyta) cultivated under land-based hatchery conditions
    Narvarte, Bienson Ceasar V.; Hinaloc, Lourie Ann R.; Genovia, Tom Gerald T.; Gonzaga, Shienna Mae C.; Tabonda-Nabor, April Mae; Roleda, Michael Y. (Elsevier, 2022-12)
    The red alga Kappaphycus alvarezii is globally cultivated as a major source of k-carrageenan. Farming of this species through clonal propagation has been confined to a few good-quality commercial strains. After more than 50 years of successful cultivation and high productivity, the production of K. alvarezii in most “cottonii”-producing countries like the Philippines had declined in recent decades. This can be attributed to low genetic variability, making “old” cultivars more susceptible to environmental stressors, pests (epi- and endophytes) and diseases (e.g., ice-ice). Hence, the establishment of new cultivars from wild strains with desirable traits may provide alternative seedstocks with different genetic makeup from the currently farmed cultivars. Here, we examined the physiological and biochemical properties of 10 new wild strains of K. alvarezii, belonging to four non-commercially cultivated haplotypes, collected from Eastern Samar, Philippines. These strains were cultivated in an outdoor, land-based hatchery with ambient light and flow-through, nutrient replete seawater. Growth rates, ranging from 0.44 % to 3.74 % d-1, significantly varied among the strains but did not significantly vary among haplotypes. The cultivars also showed a notable change in color and morphology as they adapted to hatchery conditions. Pigments and total phenolic content did not significantly vary among cultivars. Proximate analysis showed that the dry biomass of all K. alvarezii strains was composed mainly of ash (ranging from 39.2 % to 51.0 %), followed by carbohydrate (ranging from 26.0 % to 35.3 %), and with trace amounts of proteins (ranging from 1.02 % to 4.61 %). Moreover, tissue stoichiometry (C, N and P) was comparable among the 10 strains. Considering the promising growth performance of strain SamW-014 under hatchery condition, we recommend its cultivation at sea and conduct corresponding carrageenan yield and quality analyses on its raw dried biomass. Among the 10 strains, five others are also of interest and for consideration. Thereafter, selected strain(s) will be introduced to seaweed farmers for future cultivation to increase biomass production, harvest yields, and income.
    This is contribution no. 492 from the University of the Philippines- the Marine Science Institute (UPMSI), Diliman, Quezon City. We thank the BFAR 8 Regional Director Juan D. Albaladejo, Vicenta Z. Projimo, and the staff for their hospitality in facilitating the collection of wild Kappaphycus samples in Guiuan, Eastern Samar, and the Bolinao Marine Laboratory (BML) and the Marine Biogeochemistry Laboratory of UPMSI for providing a venue to conduct hatchery and laboratory experiments. We also thank Guillermo Valenzuela and Jerry Arboleda for maintaining our cultures at the BML hatchery. MYR acknowledges the Philippines Department of Science and Technology (DOST) Balik Scientist Program (BSP) fellowship.