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National Committee on Marine Sciences (NCMS)

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AGROVOC Keyword: search.filters.agrovoc.morphologyGeographic name: search.filters.geographicname.Philippines

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    Characterization of Alexandrium tamutum (Dinophyceae) isolated from Philippine waters, with the rare detection of paralytic shellfish toxin
    Benico, Garry; Azanza, Rhodora (Association of Systematic Biologists of the Philippines, 2022-04-01)
    Alexandrium tamutum M.Montressor, A.Beran & U.John is a non-toxic, bloom-forming dinoflagellate species commonly reported in temperate waters. In this study, 8 cultures of A. tamutum established from Bolinao Channel and Manila Bay, Philippines were characterized in terms of their morphology, phylogeny and toxicity. Cells were roundish, measuring 25.5 –29.84 µm long and 26.2–28.45 µm wide. The nucleus is equatorially elongated and located at the center of the cell. The chloroplasts are numerous, golden brown in color and radially arranged. Thecal tabulation is typical of Alexandrium: APC, 4', 6'', 6c, 6s, 5''', 2''''. Shape of the taxonomically informative thecal plates such as sixth precingular plate (6'') and posterior sulcal plate (sp) was similar to A. tamutum, which confirms the species identity. However, the presence of anterior and posterior attachment pores observed in our cultured isolates is the first case in this species. Molecular phylogeny inferred from LSU rDNA and ITS supports our identification by forming a well-supported clade composed of A. tamutum strains from other geographic regions. HPLC analysis showed that A. tamutum is generally non-toxic except for strain ATC9 which has low amount of decarbamoylsaxitoxin (dcSTX), resulting to a toxicity of 0.07 fmole STX eq per cell. The present study reports the first verified occurrence of Philippine A. tamutum with reliable morphological and molecular information, including the first record in Manila Bay and first detection of PST in one strain at a certain culture period.
    We acknowledge the Department of Science and Technology Philippine Council for Agriculture, Aquatic and Natural Resources Research and Development (DOST PCAARRD) and the University of the Philippines-The Marine Science Institute (UP-MSI) for the funding support. We are grateful for the assistance of Joshua Vacarizas, Keith Pinto and Jenelyn Mendoza for the molecular and toxicity analyses of the cultures. We also acknowledge Estrelita Flores, Emelita Eugenio and Jayson Orpeza for their assistance during the fieldwork and other logistical support.
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    Thecal tabulation, body scale morphology and phylogeny of Heterocapsa philippinensis sp. nov. (Peridiniales, Dinophyceae) from the Philippines
    Benico, Garry; Lum, Wai Mun; Takahashi, Kazuya; Yñiguez, Aletta T.; Iwataki, Mitsunori (Elsevier, 2021-08)
    The thecal tabulation and body scale structure of the marine armoured dinoflagellate Heterocapsa, isolated from Philippines, were examined using LM, SEM and TEM, and its phylogenetic position was inferred from ITS and LSU rDNA sequences. Cells were ovoid and the plate tabulation (Po, cp, X, 5′, 3a, 7′′, 6c, 5s, 5′′′, 2′′′′) was consistent with most Heterocapsa species. The second anterior intercalary plate (2a) had a circular pattern with a thick marginal border free of pores. The nucleus was longitudinally elongated and curved, and located at the dorsal side of the cell. Discoid lobes of brownish chloroplast were peripherally distributed, and a pyrenoid was positioned at the centre. The triradiate body scales, measuring 250–300 nm in diameter, consisted of a roundish basal plate with six radiating ridges, nine peripheral uprights/spines, and three radiating spines. These components were identical to those of H. pseudotriquetra and H. steinii, except for the roundish outline of basal plate. Molecular phylogeny showed that the species clustered with H. pseudotriquetra and H. steinii. This species was differentiated from all other Heterocapsa species in the sausage-shaped nucleus and circular pattern on the 2a plate. This study proposed a novel species Heterocapsa philippinensis sp. nov. for the isolate.
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    Submerged reef features in Apo and Tubbataha Reefs, Philippines, revealed paleo sea-level history during the last deglaciation
    Munar, Jeffrey C.; Aurelio, Mario A.; Dumalagan, Edwin E.; Tinacba, Erin Joy C.; Doctor, Ma. Angelique A.; Siringan, Fernando P. (Springer, 2024-02-27)
    The morphology of coral reefs provides an effective benchmark of past sea levels because of their limited vertical range of formation and good geologic preservation. In this study, we analyze the seafloor morphology around two atolls in the Philippines: Tubbataha Reef, in Palawan, and Apo Reef, in Occidental Mindoro. High-resolution multibeam bathymetry to a depth of 200 m reveals seafloor features including reef ridges and staircase-like terraces and scarps. Depth profiles across the reefs show terraces formed within six and seven depth ranges in Tubbataha Reef and in Apo Reef, respectively. These were further observed through a remotely operated vehicle. The terraces and scarps are interpreted as backstepping reefs that were drowned during an overall rise in sea level from the Last Glacial Maximum (LGM). Terraces are used as indicators of paleo sea level and the separation between terraces as the magnitude of sea-level rises coeval with meltwater pulse events during the last deglaciation. The pattern for both Apo and Tubbataha reefs indicates subsidence, consistent with the absence of Holocene emergent features and their atoll morphologies. Subsidence of up to 17 m since the LGM in Apo Reef is mainly attributed to the downbowing of the crust toward Manila Trench. In Tubbataha Reef, subsidence of up to 14 m is attributed to the continuous cooling of the volcanic crust underlying the atoll. These can be used to fill gaps in the tectonic history of the study sites from the last deglaciation.
    This study was funded by the Department of Science and Technology–Philippine Council for Agriculture, Aquatic and Natural Resources Research Development (DOST-PCARRD) Geophysical Coral Mapping Project and Acquisition of Detailed Bathymetry for Coastal Erosion Management Project both under F. P. Siringan, and National Assessment of Coral Reef Environment (NACRE) Project under Hazel Arceo. We would like to mention, in particular, Dominic Jone Cabactulan, Timothy Quimpo, Ronald Olavides, Mary Ann Calleja, Patrick Cabaitan, and Cesar Villanoy who were members of the project team. We thank the Tubbataha Management Office, Sablayan Local Government Unit, and Department of Environment and Natural Resources for the work permits and logistical help during the surveys.
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    Variation in epibiont communities among restocked giant clam species (Cardiidae: Tridacninae) and across different habitat types
    de Guzman, Ian Joseph A.; Cabaitan, Patrick C.; Hoeksema, Bert W.; Sayco, Sherry Lyn G.; Conaco, Cecilia (Springer, 2023-07-07)
    Giant clam shells provide a solid substrate for various species of epibionts. Yet, it is not well known how epibiont communities vary among populations of different giant clam species and in giant clams restocked in different habitat types. Here, we examined differences in the epibiont communities of three species of giant clams with different shell morphology (Tridacna gigas, Tridacna derasa, and Hippopus hippopus), and characterized the epibiont communities on T. gigas from three different habitat types (sandy reef flat, seagrass bed, and coral reef). Tridacna gigas had higher species richness, abundance, and cover of epibionts compared to the other two species. Tridacna gigas in coral reef habitat also displayed higher species richness and cover of sessile epibionts, while the same species in the sandy reef flat had higher species richness and abundance of mobile epibionts. Epibiont communities were more variable across habitat types than among different giant clam species restocked in a similar area. Differences in abundance of Trochus sp., Pyramidella sp., and crustose coralline algae contributed to the variability in epibiont communities among the giant clam species and across habitats. A few taxa were observed only on specific giant clam species and sites. For instance, Diadema sp. and Echinometra sp. were found only on T. gigas, and Diadema sp. was present only in the sandy reef flat. Both the complexity of the giant clam shells and habitat type contribute to differences in associated epibiont communities. This further emphasizes the ecological importance of giant clams as habitats for other invertebrates.
    The authors acknowledge Jun Castrence and the staff of Bolinao Marine Laboratory for assistance with field work. We also acknowledge the assistance of Edwin Dumalagan with coral and algae identification, Timothy Quimpo for his assistance and advice on statistical analysis, and Elizabeth Gomez for her assistance in generating the map of study sites. Lastly, we would like to thank members of the Coral Reef Ecology Laboratory (CoRE) for their helpful comments and suggestions on the study. This study was supported by a grant from the Philippine Council for Agriculture, Aquatic, and Natural Resources Research and Development of the Department of Science and Technology to PCC and CC (QMSR-MRRD-MEC-314-1542) and a Department of Science and Technology ASTHRDP Scholarship and University of the Philippines Marine Science Institute Thesis Writing Grant 2020 to ID. We thank the reviewers for the suggestions that helped improve our paper.