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National Committee on Marine Sciences (NCMS)

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  • C30 — A simple, rapid, scientifically valid, and low-cost method for citizen-scientists to monitor coral reefs
    Licuanan, Wilfredo Y.; Mordeno, Princess Zyrlyn B.; Go, Marco V. (Elsevier, 2021-09)
    The extent and speed of recent changes in reef coral abundances due to ocean warming and human impacts require more widespread capability to map and measure these changes, especially in countries like the Philippines. We present “C30”, a simple, rapid, scientifically valid, and low-cost method for skin divers or freedivers to take random photo-quadrat images within predefined stations on the upper reef slope. C30 yields coral cover data similar to those collected using the more intensive C5 method and can be as powerful in detecting small differences in reef cover. Less time is also needed for training personnel and sampling. However, more photo-quadrat images, better cameras, and closer collaboration with local scientists are required if higher precision data and estimates of coral diversity are needed from C30. C30 is a valuable tool for participatory, community-based citizen science monitoring of coral reefs.
    We thank the Department of Science and TechnologyPhilippine Council for Agriculture, Aquatic and Natural Resources Research and Development (QMSR-MRRD-COR-0-1209 and PCAARRD-GIA 4478), and the Department of Environment and Natural Resources Coral Reef Visualization and Assessment, The Philippines Project for funding some of the fieldwork. The initial research on citizen-science monitoring was undertaken with funding from Oscar M. Lopez Center for Climate Change Adaptation and Disaster Risk Management Foundation, Inc., The Philippines (Grant number OMLC RG 2017-18). We also thank the DLSU Innovation and Technology Office for the patent application for the C30 monopod in the Intellectual Property Office of the Philippines. The comments and suggestions of the reviewers are acknowledged and are very much appreciated. WY Licuanan is the holder of the Br H Alfred Shields FSC Professorial Chair in Biology and Br Cresentius Richard Duerr FSC Professorial Chair in Biochemistry.
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    Increased coral larval supply enhances recruitment for coral and fish habitat restoration
    Harrison, Peter L.; dela Cruz, Dexter W.; Cameron, Kerry A.; Cabaitan, Patrick C. (Frontiers Media SA, 2021-12-01)
    Loss of foundation reef-corals is eroding the viability of reef communities and ecosystem function in many regions globally. Coral populations are naturally resilient but when breeding corals decline, larval supply becomes limiting and natural recruitment is insufficient for maintaining or restoring depleted populations. Passive management approaches are important but in some regions they are proving inadequate for protecting reefs, therefore active additional intervention and effective coral restoration techniques are needed. Coral spawning events produce trillions of embryos that can be used for mass larval rearing and settlement on degraded but recoverable reef areas. We supplied 4.6 million Acropora tenuis larvae contained in fine mesh enclosures in situ on three degraded reef plots in the northwestern Philippines during a five day settlement period to initiate restoration. Initial mean larval settlement was very high (210.2 ± 86.4 spat per tile) on natural coral skeleton settlement tiles in the larval-enhanced plots, whereas no larvae settled on tiles in control plots. High mortality occurred during early post-settlement life stages as expected, however, juvenile coral survivorship stabilised once colonies had grown into visible-sized recruits on the reef by 10 months. Most recruits survived and grew rapidly, resulting in significantly increased rates of coral recruitment and density in larval-enhanced plots. After two years growth, mean colony size reached 11.1 ± 0.61 cm mean diameter, and colonies larger than 13 cm mean diameter were gravid and spawned, the fastest growth to reproductive size recorded for broadcast spawning corals. After three years, mean colony size reached 17 ± 1.7 cm mean diameter, with a mean density of 5.7 ± 1.25 colonies per m–2, and most colonies were sexually reproductive. Coral cover increased significantly in larval plots compared with control plots, primarily from A. tenuis recruitment and growth. Total production cost for each of the 220 colonies within the restored breeding population after three years was United States $17.80 per colony. A small but significant increase in fish abundance occurred in larval plots in 2018, with higher abundance of pomacentrids and corallivore chaetodontids coinciding with growth of A. tenuis colonies. In addition, innovative techniques for capturing coral spawn slicks and larval culture in pools in situ were successfully developed that can be scaled-up for mass production of larvae on reefs in future. These results confirm that enhancing larval supply significantly increases settlement and coral recruitment on reefs, enabling rapid re-establishment of breeding coral populations and enhancing fish abundance, even on degraded reef areas.
    We thank the Australian Centre for International Agricultural Research (ACIAR) for funding this research: grant ACIAR/FIS/2014/063 to PH, PC and J. Bennett. Thanks to ACIAR staff Chris Barlow, Ann Fleming, and Mai Alagcan for their ongoing support. Sincere thanks to the Galsim Family for use of Tanduyong Island as a field research base during the coral restoration fieldwork. We also thank staff and students at the Bolinao Marine Laboratory, Marine Science Institute, University of the Philippines, Diliman for their assistance with reef work: Elizabeth Gomez, Charlon Ligson, Rickdane Gomez and Fernando Castrence (including fish surveys), Marcos Ponce, Joey Cabasan, Sheldon Boco, Gabriel de Guzman, Albert Ponce, and Allan Abuan. We also thank Grant Cameron for field support and helping design, build and refine the prototype floating spawn catcher frames in 2016 and 2017.
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    Individual and interactive effects of ocean warming and acidification on adult Favites colemani
    Tañedo, Mikhael Clotilde S.; Villanueva, Ronald D.; Torres, Andrew F.; Ravago-Gotanco, Rachel; San Diego-McGlone, Maria Lourdes (Frontiers Media SA, 2021-09-09)
    Tropical coral reefs are threatened by local-scale stressors that are exacerbated by global ocean warming and acidification from the post-industrial increase of atmospheric CO2 levels. Despite their observed decline in the past four decades, little is known on how Philippine coral reefs will respond to ocean warming and acidification. This study explored individual and synergistic effects of present-day (pH 8.0, 28°C) and near-future (pH 7.7, 32°C) scenarios of ocean temperature and pH on the adult Favites colemani, a common massive reef-building coral in Bolinao-Anda, Philippines. Changes in seawater temperature drive the physiological responses of F. colemani, whereas changes in pH create an additive effect on survival, growth, and photosynthetic efficiency. Under near-future scenarios, F. colemani showed sustained photosynthetic competency despite the decline in growth rate and zooxanthellae density. F. colemani exhibited specificity with the Cladocopium clade C3u. This coral experienced lower growth rates but survived projected near-future ocean warming and acidification scenarios. Its pH-thermal stress threshold is possibly a consequence of acclimation and adaptation to local environmental conditions and past bleaching events. This research highlights the importance of examining the susceptibility and resilience of Philippine corals to climate-driven stressors for future conservation and restoration efforts in the changing ocean.
    We are grateful to the Marine Biogeochemistry Laboratory and Bolinao Marine Laboratory of the Marine Science Institute, University of the Philippines for the valuable logistical and laboratory support provided. We would also like to thank Drs. Haruko Kurihara, Atsushi Watanabe, and Toshihiro Miyajima for the design of the mass flow controller used in the experiments. This is UP-MSI contribution number 484.
  • Juvenile scleractinian assemblage and its association with adults and benthos at shallow and upper mesophotic depths in fringing and atoll reefs in the Philippines
    Albelda, Ritzelle L.; Cabaitan, Patrick C.; Sinniger, Frederic P.; Dumalagan, Edwin Jr; Quimpo, Timothy Joseph R.; Olavides, Ronald Dionnie D.; Munar, Jeffrey C.; Villanoy, Cesar L.; Siringan, Fernando (Elsevier B.V, 2020-10-15)
    The juvenile stage is a critical part of a scleractinian’s life history as it is when they are highly vulnerable to various post-settlement mortality processes, which influence the structure of adult scleractinian assemblages. Although numerous studies have been done to understand dynamics of juvenile assemblages at shallow water reefs (SWRs), similar studies on deeper and less explored reefs, such as mesophotic coral ecosystems (MCEs) remain limited. Using diver-based photo-quadrat method, we aimed to examine how juvenile scleractinian assemblages vary from SWRs (shallow: 3 to 10 m and middle: 10 to 20 m) to upper MCEs (deep: 30 to 40 m) in the fringing and atoll reefs in the Apo Reef Natural Park, Philippines. We also aimed to understand the potential association of juvenile scleractinian densities with adult scleractinian densities and benthic cover. A total of 12 families were recorded for both juveniles and adults with Poritidae being the most abundant, followed by Pocilloporidae and Acroporidae (and Merulinidae for juveniles only). Juvenile densities (ranging from 14 to 36 individuals/m2) varied among depth zone and reef type interactions and had a bimodal distribution, with the middle zone having the lowest density compared to the shallow and deep zones. Juvenile densities were correlated to benthic cover, particularly to high algal cover in the middle zone and availability of bare hard substrate in the shallow zone. Adult densities were also correlated with juvenile densities, but not commonly in the middle zone, emphasizing that it is only one of the many variables that contribute to juvenile assemblages. This study is the first to document juvenile scleractinian assemblages, how they vary from SWRs to MCEs in the Philippines and the Coral Triangle, and demonstrates the importance of benthos and adult brood stock in shaping juvenile scleractinian assemblages across depth zones.
  • Submerged reef features in Apo and Tubbataha Reefs, Philippines, revealed paleo sea-level history during the last deglaciation
    Munar, Jeffrey C.; Aurelio, Mario A.; Dumalagan, Edwin E.; Tinacba, Erin Joy C.; Doctor, Ma. Angelique A.; Siringan, Fernando P. (Springer, 2024-02-27)
    The morphology of coral reefs provides an effective benchmark of past sea levels because of their limited vertical range of formation and good geologic preservation. In this study, we analyze the seafloor morphology around two atolls in the Philippines: Tubbataha Reef, in Palawan, and Apo Reef, in Occidental Mindoro. High-resolution multibeam bathymetry to a depth of 200 m reveals seafloor features including reef ridges and staircase-like terraces and scarps. Depth profiles across the reefs show terraces formed within six and seven depth ranges in Tubbataha Reef and in Apo Reef, respectively. These were further observed through a remotely operated vehicle. The terraces and scarps are interpreted as backstepping reefs that were drowned during an overall rise in sea level from the Last Glacial Maximum (LGM). Terraces are used as indicators of paleo sea level and the separation between terraces as the magnitude of sea-level rises coeval with meltwater pulse events during the last deglaciation. The pattern for both Apo and Tubbataha reefs indicates subsidence, consistent with the absence of Holocene emergent features and their atoll morphologies. Subsidence of up to 17 m since the LGM in Apo Reef is mainly attributed to the downbowing of the crust toward Manila Trench. In Tubbataha Reef, subsidence of up to 14 m is attributed to the continuous cooling of the volcanic crust underlying the atoll. These can be used to fill gaps in the tectonic history of the study sites from the last deglaciation.
    This study was funded by the Department of Science and Technology–Philippine Council for Agriculture, Aquatic and Natural Resources Research Development (DOST-PCARRD) Geophysical Coral Mapping Project and Acquisition of Detailed Bathymetry for Coastal Erosion Management Project both under F. P. Siringan, and National Assessment of Coral Reef Environment (NACRE) Project under Hazel Arceo. We would like to mention, in particular, Dominic Jone Cabactulan, Timothy Quimpo, Ronald Olavides, Mary Ann Calleja, Patrick Cabaitan, and Cesar Villanoy who were members of the project team. We thank the Tubbataha Management Office, Sablayan Local Government Unit, and Department of Environment and Natural Resources for the work permits and logistical help during the surveys.
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    Fish and benthic communities in an offshore and well-managed coral reef after bleaching disturbance in the Philippines
    Quimpo, Timothy Joseph R.; Requilme, Jeremiah Noelle; Gomez, Elizabeth; Sayco, Sherry Lyn; Dumalagan, Edwin E.; Siringan, Fernando P.; Conaco, Cecilia; Cabaitan, Patrick C. (Springer, 2023-08-29)
    Climate change is perhaps the greatest threat to coral reefs worldwide. However, there is spatial variation in the extent and severity of this disturbance, with offshore and well-managed reefs presumed to be less vulnerable to anthropogenic disturbance. Here, fish and benthic communities at the offshore and well-managed reefs of Apo Reef Natural Park, Philippines, were examined during a bleaching disturbance in 2016 and reassessed 2 (2018) and 3 years (2019) after using scuba surveys. Results showed that benthic communities varied more strongly with year attributed to changes in the benthic cover of coral. These changes were influenced by site, with some sites experiencing coral loss of 41–48%, while other sites exhibited minimal changes. Site differences in coral loss may be associated with coral cover, with sites that had high coral cover prior to bleaching incurring larger loss of coral cover. Fish communities varied more with sites and was associated with differences in the predominant benthos. The stability of fish communities with year despite coral loss may be attributed to the minimal loss of coral cover at some sites. For sites that experienced high losses of coral cover, the presence of alternative and deeper habitats may have provided shelter and food for more mobile fishes maintaining taxonomic composition within sites. This study shows that bleaching disturbance circumvents effective management, but impacts are variable even at small (≤ 3 km) spatial scales. Benthic community composition and presence of alternative habitats potentially alleviate the negative impacts of bleaching on reef fish diversity and abundance.
    We are grateful to the laboratory assistants F Castrence, R de Guzman, B Gabuay, R Valenzuela and K Adolfo for their assistance in the fieldwork. We thank the comments and criticisms of two anonymous reviewers that greatly improved the content of this manuscript.
  • Multiple severe storms revealed by coral boulders at Pasuquin, northwestern Luzon, Philippines
    Gong, Shou-Yeh; Liu, Sze-Chieh; Siringan, Fernando P.; Gallentes, Adonis; Lin, Han-Wei; Shen, Chuan-Chou (Elsevier, 2022-11-15)
    Over 30 meter-sized coral boulders are scattered 45–140 m away from the edge and above high tide on a Holocene reef flat at Pasuquin, northwestern Luzon, Philippines. The boulders are overturned or tilted as indicated by the framework fossil corals in them, but have the same lithology as those along the reef edge and thus were likely broken off from there. The dimensions of boulders larger than 3 m were calculated from 3D models constructed by photogrammetry. Their volumes range from 10 to 53 m3. Assuming 2.1 g/cm3 for wet density, weights of boulders would range from 21 to 110 metric tons. Boulders of such size and weight can't be moved by normal waves, and thus must have been dislodged by extreme wave events (EWEs). Small and well-preserved corals found on the surface of seven boulders were collected for 230Th dating to reconstruct the timing of displacement. The ages of corals are 1781.6 ± 1.9, 1903.4 ± 2.7, 1945.8 ± 1.2, 1956.9 ± 1.2, 1956.75 ± 0.99, 1978.1 ± 1.5 and 2002.78 ± 0.88 CE, respectively. These ages are considered to constrain the timing of boulder displacement from the reef edge. We propose that typhoon-induced EWEs were responsible for the displacement of these boulders at Pasuquin.
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    Sea surface carbonate dynamics at reefs of Bolinao, Philippines: Seasonal variation and fish mariculture-induced forcing
    Isah, Raffi R.; Enochs, Ian C.; San Diego-McGlone, Maria Lourdes (Frontiers, 2022-11-11)
    Coral reefs are vulnerable to global ocean acidification (OA) and local human activities will continue to exacerbate coastal OA. In Bolinao, Philippines, intense unregulated fish mariculture has resulted in regional eutrophication. In order to examine the coastal acidification associated with this activity and the impact on nearby coral reefs, water quality and carbonate chemistry parameters were measured at three reef sites, a mariculture site and an offshore, minimally impacted control site during both the wet and dry season. Additionally, benthic community composition was characterized at reef sites, and both autonomous carbonate chemistry sampling and high-frequency pH measurements were used to characterize fine-scale (diel) temporal variability. Water quality was found to be poorer at all reefs during the wet season, when there was stronger outflow of waters from the mariculture area. Carbonate chemistry parameters differed significantly across the reef flat and between seasons, with more acidic conditions occurring during the dry season and increased primary production suppressing further acidification during the wet season. Significant relationships of both total alkalinity (TA) and dissolved inorganic carbon (DIC) with salinity across all stations may imply outflow of acidified water originating from the mariculture area where pH values as low as 7.78 were measured. This apparent mariculture-induced coastal acidification was likely due to organic matter respiration as sustained mariculture will continue to deliver organic matter. While TA-DIC vector diagrams indicate greater contribution of net primary production, net calcification potential in the nearest reef to mariculture area may already be diminished. The two farther reefs, characterized by higher coral cover, indicates healthier ecosystem functioning. Here we show that unregulated fish mariculture activities can lead to localized acidification and impact reef health. As these conditions at times approximate those projected to occur globally due to OA, our results may provide insight into reef persistence potential worldwide. These results also underscore the importance of coastal acidification and indicate that actions taken to mitigate OA on coral reefs should address not only global CO2 emissions but also local perturbations, in this case fish mariculture-induced eutrophication.
    This paper is part of the master’s thesis of RI supervised by MS-M entitled “Carbonate chemistry dynamics on the Bolinao reef flat”. The authors are grateful to the Marine Biogeochemistry Laboratory and Bolinao Marine Laboratory of the Marine Science Institute, University of the Philippines for the valuable logistical and laboratory support provided. We thank Jay Burce, Ryan Carl Magyaya, Natasha Tamayo for their tremendous help in field activities and laboratory analyses. We thank Alice Webb for providing insights into improving the manuscript.
  • Genus and size-specific susceptibility of soft corals to 2020 bleaching event in the Philippines
    Baran, Christine; Luciano, Rhea Mae A.; Segumalian, Christine; Valino, Darryl Anthony; Baria-Rodriguez, Maria Vanessa (Taylor & Francis, 2023-05-08)
    Soft corals are zooxanthellate sessile animals supporting various organisms in coral reefs. However, their populations are threatened by the impacts of ocean warming. Under thermal stress conditions, soft corals may experience mild to severe bleaching which may lead to death. Understanding soft coral bleaching responses highlights the importance in predicting how populations and diversity may be affected by changing climate scenarios. In this study, we examined the bleaching responses of the three dominant soft coral genera (Lobophytum, n = 1318; Sarcophyton, n = 116; Sinularia, n = 639 colonies) in the Bolinao-Anda Reef Complex (BARC), Pangasinan, north-western Philippines during the 2020 thermal stress event in terms of genus and colony size susceptibility, and zooxanthellae density. Degree heating week (DHW) data from 1986–2020 were obtained using remotely sensed data to determine thermal anomalies in the study sites. The maximum DHW (6.3) in 2020 occurred between July–August while bleaching surveys were done during October of the same year. The percentage of bleached portions in each colony was used to determine bleaching category: no bleaching (0%), moderately bleached (1–50%) and heavily bleached (>50%). Quantification of bleaching prevalence and susceptibility of colony sizes were determined by colony count and mean diameter measurements taken from quadrat photographs in October 2020. Haphazard tissue collection (∼3 cm) in each colony of three soft coral genera per bleaching category was done to quantify zooxanthellae density. Results showed that Lobophytum colonies had the lowest bleaching prevalence (41%), followed by Sinularia (66%) and Sarcophyton (78%). All colony size classes of the three genera were susceptible to bleaching. However, smaller colonies of Lobophytum (<15 cm), Sarcophyton (<5 cm) and Sinularia (<5 cm) showed less susceptibility than large colonies. Zooxanthellae density was significantly reduced in moderately and heavily bleached colonies. The results of this study highlight that bleaching susceptibility is genus specific, with Sarcophyton and Sinularia being more susceptible to bleaching than Lobophytum. Smaller colonies seemed to be less susceptible to bleaching than large-sized soft corals suggesting a differential thermal stress response. Spatial variations in bleaching prevalence were also found among reef sites with varying environmental conditions and thermal stress histories. This work provided initial observations on how bleaching affects soft corals. Further studies on soft coral community recovery are recommended to fully understand how these organisms perform after thermal stress events.
    We acknowledge the Bolinao Marine Laboratory of the University of the Philippines for logistics and fieldwork assistance. Thanks to Kevin Yatco and Socorro Rodrigo for providing technical assistance in obtaining remotely sensed temperature data. Thank to Kevin Yatco and Socorro Rodrigo, and Kevin Labrador for providing technical assistance in obtaining remotely sensed temperature data and assistance in statistical analysis, respectively.