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Challenge 07: Expand the Global Ocean Observing System

Permanent URI for this collectionhttps://repository.unesco.gov.ph/handle/123456789/28

Ocean Decade


Challenge 07:
Expand the Global Ocean Observing System



Ensure a sustainable and sustained ocean observing system across all ocean basins that delivers accessible, timely and actionable data and information to all users.

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2021 - 20222

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    Detection of horizontal gene transfer in the genome of the choanoflagellate Salpingoeca rosetta
    Matriano, Danielle M.; Alegado, Rosanna A.; Conaco, Cecilia (Springer, 2021-03-16)
    Horizontal gene transfer (HGT), the movement of heritable materials between distantly related organisms, is crucial in eukaryotic evolution. However, the scale of HGT in choanoflagellates, the closest unicellular relatives of metazoans, and its possible roles in the evolution of animal multicellularity remains unexplored. We identified at least 175 candidate HGTs in the genome of the colonial choanoflagellate Salpingoeca rosetta using sequence-based tests. The majority of these were orthologous to genes in bacterial and microalgal lineages, yet displayed genomic features consistent with the rest of the S. rosetta genome—evidence of ancient acquisition events. Putative functions include enzymes involved in amino acid and carbohydrate metabolism, cell signaling, and the synthesis of extracellular matrix components. Functions of candidate HGTs may have contributed to the ability of choanoflagellates to assimilate novel metabolites, thereby supporting adaptation, survival in diverse ecological niches, and response to external cues that are possibly critical in the evolution of multicellularity in choanoflagellates.
    We thank Joshua Dizon and Francis Tablizo of the Philippine Genome Center Core Facility for Bioinformatics for assistance with scripts and database construction. We thank Becca Lensing (University of Hawai’i), Cheryl Andam (University of New Hampshire), Deo Onda and Ron Leonard Dy (University of the Philippines) for insightful comments and suggestions on the analysis and interpretation of the data. This work was supported by thesis grants from the Department of Science and Technology Accelerated Science and Technology Human Resource Development Program-National Science Consortium (DOST-ASTHRDP-NSC) and the University of the Philippines Marine Science Institute to DM.
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    Survival and growth of coral recruits in varying group sizes
    Ligson, Charlon A.; Cabaitan, Patrick C.; Harrison, Peter L. (Elsevier, 2022-11)
    Coral larvae usually settle as solitary individuals but sometimes also in aggregations, especially when settlement sites are limited. Fusion of coral individuals can consist of different group sizes with varying numbers of adjacent coral spat. However, little is known about the performance of coral individuals in different group sizes, especially during the early post-settlement phase, where high mortality usually occurs. Here, we investigated the performance of Acropora verweyi juveniles in varying group sizes of fused coral spat. Specifically, we examined the survival and growth rate of coral individuals, with four group size levels: solitary spat, 2, 3–5, 6–9, and 10–28-spat group size, over 21 weeks post-settlement. The highest survival was detected in the 6–9 spat group size followed by the 3–5 and 10–28 group sizes, with lower survival in the 2-spat group size and solitary spat. Overall, 7.4% of the 338 coral individuals reared in ex-situ hatchery conditions survived up to the last monitoring at 21 weeks. At 15 weeks post-settlement, the mean surface areas of solitary and 2-spat group sizes were five- to eight-fold smaller than in larger fused coral individuals. However, there were no significant differences between the percent growth changes among the coral group sizes. The present study suggests that fused coral spat of larger group sizes can immediately gain size, but not necessarily have higher growth rates within the first 15 weeks post-settlement. Results also revealed that fusions of at least six A. verweyi spat had higher survival than small fused individuals and solitary spat, at least in the first few months after settlement. The advantage of such fusions, especially in larger group sizes, may offer an enhanced survival for coral spat during the critical period of early post-settlement. This outcome provides potential advantages for coral restoration using sexual production of larvae.
    We are grateful to all the staff and research assistants at the Bolinao Marine Laboratory, especially to D. dela Cruz, E. Gomez, R. Adolfo, K. Adolfo, and M. Ponce for logistical support. We also thank K. Cameron for comments on an earlier version of this manuscript. This study was funded by an Australian Centre for International Agricultural Research (ACIAR) grants FIS/2014/063 and FIS/2019/123 to PLH. We thank C. Barlow and A. Fleming from ACIAR for their project support.