Journal Articles - UP - MSI
Permanent URI for this collectionhttps://repository.unesco.gov.ph/handle/123456789/50
Browse
32 results
Search Results
- Growth, agar yield and quality of selected agarophyte species from the PhilippinesAraño, K. G.; Trono, G. C.; Montaño, N. E.; Hurtado, A. Q.; Villanueva, R. D. (Walter de Gruyter GmbH, 2000-01-30)Three local agarophyte species (Gracilaria firma, Gracilaria sp. and Gracilariopsis bailinae) were grown under controlled outdoor flow-through culture conditions. Growth rates and agar characteristics of the three species were determined. Gracilaria firma showed superior growth and agar quality among the three species. It exhibited the highest growth rate, highest agar gel strength and was observed to be highly resistant to epiphytes. Growth experiments under various light and ammonium combinations showed that the highest photon flux density level (900 μ mol m−2s−1) and moderate ammonium (150 μM NH4Cl) concentration gave the highest growth rates for all species. The single and interactive effects of light and ammonium enrichment on growth and agar characteristics of the three species were highly significant.
- In vitro carpospore release and germination in Kappaphycus alvarezii (Doty) Doty from Tawi-Tawi, PhilippinesAzanza, R. V.; Aliaza, T. T. (Walter de Gruyter GmbH, 1999-01-11)In vitro carpospore release and germination experiments in Kappaphycus alvarezii (Doty) Doty farmed in Tawi-Tawi, Philippines, were conducted to develop new mariculture techniques for this carrageenophyte traditionally farmed for many years using cuttings. Carpospore release was assessed over 40 d. Maximum production was attained after fertile branches were exposed to air for a period of 0.5 to 1 h at 240 μmol photons m−2 s−1 and subsequently immersed in seawater at 200 μmol photons m−2 s−1 and at 30 and 35 ppt salinities. Highest average carpospore output from days 1 to 5 was 279,000 carpospore/g wet weight of thallus. Nutrient enrichment (F/2 medium) seems to have little effect on spore release. Carpospore settlement occurred 3–5 days after release. The first branch formed after 26 d in diluted F/2 (F/20) media at 35 ppt salinity and 160 μmol photons m−2 s−1. Low irradiance (7 μmol photons m−2 s−1) and low or high salinities (25, 40 ppt) appeared to inhibit release and germling development. Higher levels of nutrients (F/2, F/20) enhanced growth of contaminants and reduced carpospore viability. Germling growth was highest in the more enriched medium (F/2) (10.57% growth d−1) when compared to F/20 medium (2.26 growth d−1).
- Acetic acid pretreatment in agar extraction of Philippine Gelidiella acerosa (Forsskaal) Feldmann et Hamel (Rhodophyta, Gelidiales)Roleda, M. Y.; Montaño, N. E.; Ganzon-Fortes, E. T.; Villanueva, R. D. (Walter de Gruyter GmbH, 1997)Application of different pre-extraction treatments and extraction methods were used to isolate agar from Gelidiella acerosa. Acetic acid pretreatment entailed soaking the sample in 0.5% acetic acid for 1 hour at 16-20 °C. Alkali pretreatment entailed treatment with l N NaOH at 90°C for 1 hour and eutralization in weak acid for another hour at 16-20 °C. Native agar was extracted directly from air dried samples. One hour extraction using steam pressure at 15-2PSI and boiling at 100 °C in a water bath were applied respectively. Comparative analysis showed that the acetic acid pretreated and autoclaved sample gave the highest agar yield (29.8 ± 2.41%) and gel strength (676 ± 4 g cm"2) among the extraction methods applied. Other physico-chemical properties of acid-modified agar were measured. Relative viscosity of a 1.0% solution at 65 °C ranged from 5-70 cps. A melting temperature of 90-98 °C is comparable to that of the agars from most Gelidiales, while a gelling temperature of 42-47 °C is relatively high which is suspected to be associated with a number of chemical variables masking or altering the basic structural unit of agar. Temperature hysteresis (difference between gelling and melting temperatures) at 48—50 °C was comparable to that of Difco Bacto agar tested at 50 °C.
- Influence of light, water motion, and stocking density on the growth and pigment content of Halymenia durvillei (Rhodophyceae) under laboratory conditionsRula, Najeen Arabelle M.; Ganzon-Fortes, Edna T.; Pante, Ma. Josefa R.; Trono, Gavino C. (Springer, 2021-05-17)The tropical red seaweed Halymenia durvillei Bory de Saint Vincent is a potential source of the high-value pigments, r-phycoerythrin (RPE) and r-phycocyanin (RPC). The unique properties of these pigments find many applications—from food to cosmetics, pharmaceuticals, and biomedical research. This study aimed to improve the land-based culture technology of H. durvillei by determining the appropriate combination of light, water motion, and stocking density that would result in high growth performance and high RPE and RPC content. Combinations of two light levels (full light, 100% and reduced light, 67%), two water motion levels (low and moderate), and three stocking densities (50, 100, and 200 g) were studied using 64.5-L glass tanks with flow-through seawater and aeration systems at the outdoor land-based seaweed nursery in Bolinao, Pangasinan, Philippines. After 6 weeks of culture, growth performance (growth rate and productivity) of H. durvillei and phycobiliprotein content were best under a combination of full light (100%), moderate water motion, and 50-g stocking density. The generally low light regime during the experimental period, which coincided with the cold, dry season characterized by shorter days and overcast skies, may have influenced H. durvillei to maximize the use of available resources such as light and possible increased nutrient availability from water motion to promote growth and phycobiliprotein synthesis. Treatments with low stocking densities generally showed satisfactory growth and phycobiliprotein content. This study provides groundwork for future research into mechanisms by which these and other factors affect the growth and physiology of H. durvillei in culture.
- Expressed sequence tags (ESTs) from the marine red alga Gracilaria gracilisLluisma, Arturo O.; Ragan, Mark A. (Springer, 1997-06)Expressed sequence tags (ESTs) are partial sequences of cDNAs, and can be used to characterize gene expression in organisms or tissues. We have constructed a 200-sequence EST database from vegetative thalli of Gracilaria gracilis, the first ESTs reported from any alga. This database contains recognizable ESTs corresponding to genes of carbohydrate metabolism (seven), amino acid metabolism (three), photosynthesis (five), nucleic acid synthesis, repair and processing (three), protein synthesis (14), protein degradation (six), cellular maintenance and stress response (three), other identifiable protein-coding genes (13) and 146 sequences for which significant matches were not found in existing sequence databases. We have already used this EST database to recover genes of carbohydrate biosynthesis from G. gracilis.
- Seasonal variations in the yield, gelling properties, and chemical composition of agars from Gracilaria eucheumoides and Gelidiella acerosa (Rhodophyta) from the PhilippinesVillanueva, R. D.; Montaño, N. E.; Romero, J. B.; Aliganga, A. K. A.; Enriquez, E. P. (Walter de Gruyter GmbH, 1999-01-01)The yield, physical, and chemical properties of agars from two Philippine red seaweeds, Gracilaria eucheumoides and Gelidiella acerosa, were investigated on a bimonthly basis. The yield of agar from Gracilaria eucheumoides was at a maximum during the early rainy season (May, 29%) and at a minimum during the summer month of March (20%). In Gelidiella acerosa, a peak in agar yield was also recorded in May (21%), with generally higher yields recorded during the rainy than in the dry season. Agar gel strengths fluctuated from 225 to 430 g cm−2 and from 160 to 820 g cm−2 for Gracilaria eucheumoides and Gelidiella acerosa, respectively, and both agars exhibited strongest gels in July. Significant seasonal variations were observed in the gelling and melting temperatures of agar from Gracilaria eucheumoides, but not from Gelidiella acerosa. Sulphate content only varied slightly in agar samples from Gracilaria eucheumoides, while a higher sulphate content was found in Gelidiella acerosa agar during the dry season. Moreover, the sulphate content in G. acerosa agar fluctuated inversely with the 3,6-anhydrogalactose content. A FT-IR analysis showed a fairly constant spectrum for temporal Gracilaria eucheumoides agar while peaks attributed to S–O vibrations intensified in Gelidiella acerosa samples which were recorded to contain high sulphate residues and possess low gel strengths. Diagnosis of the FT-IR spectra in the 1000–400 cm−1 frequency range was also conducted in comparison with agarose and Gracilaria chilensis agar.
- Highly methylated agar from Gracilaria edulis (Gracilariales, Rhodophyta)Villanueva, Ronald; Montaño, Nemesio (Springer, 1999-04)The structure and gelling properties of alkali-modified agar from Gracilaria edulis were investigated. 1H and 13C NMR experiments revealed a basic repeating unit of alternating 3-linked 6- O-methyl-β-D-galactopyranose and 4-linked 3,6-anhydro-α-L-galactopyranose. Partial methylation at O-2 of the anhydrogalactose moiety was also revealed. Meanwhile, the O-4 of the methylated galactose residue was detected to exhibit partial sulfation by NMR and FT-IR spectroscopy. The gel strength and syneresis index of the extracted agar were considerably enhanced by the addition of sodium, potassium, and calcium ions. The ion-driven gelation and peculiar sulfate position conferred the agar's similarity to κ-carrageenan.
- Occurrence of closely spaced genes in the nuclear genome of the agarophyte Gracilaria gracilisLluisma, Arturo O.; Ragan, Mark A. (Springer, 1999)Little is known about the structure and organisation of nuclear genomes in red algae. In particular, it is not known whether genes are densely or loosely packed, whether gene order is conserved, whether their genes tend to occur in one or multiple copies and whether their nuclear genes tend to be compact or interrupted by numerous introns. Sequencing of cloned genomic DNA from Gracilaria gracilis has begun to provide provisional answers to some of these questions. Four pairs of closely spaced genes have been found in G. gracilis upon sequencing genomic clones that contain genes for UDPglucose pyrophosphorylase, galactose-1-phosphate uridylyltransferase, the β subunit of tryptophan synthetase, and methionine sulphoxide reductase (a fifth pair of closely spaced genes, encoding polyubiquitin and aconitase, was reported earlier). An open reading frame with significant similarity to another known gene occurs close (< 1.7 kbp) to each of these genes. In two pairs the intergenic region is less than 400 bp in length, and for these the location of the putative polyadenylation signals indicates that the gene transcripts, encoded on opposite strands, have overlapping (hence complementary) 3′ regions. These somewhat unexpected findings begin to establish a basis for genome-level characterisation of red algae.
- Enrichment of the protein content of the macroalgae Saccharina latissima and Palmaria palmataAasen, Inga Marie; Sandbakken, Ingrid S.; Toldnes, Bendik; Roleda, Michael Y.; Slizyte, Rasa (Elsevier, 2022-06)The large brown seaweeds (kelps) are potential sources of protein for animal feed. They have lower protein contents than most red and green algae, but due to potential for large-scale production, they may represent a significant future protein source. The impact of pH, temperature and polysaccharide-degrading enzymes on the solubility and extraction yields of protein from wet Saccharina latissima biomass was investigated. The protein solubility increased with increasing pH and reached maximum of 23% at pH 11, determined as total amino acids (TAA). The enzyme treatments increased the release of soluble compounds by 30–35%. The highest protein yield obtained was 19%, using a ratio of water to wet seaweed of 1:1 for extraction. Even if the yields can be increased by increasing the water amounts used for extraction, the majority of the protein would remain in the insoluble residue after separation. The strategy for production of a larger quantity of protein-enriched biomass was therefore to maintain the insoluble fraction as the product. A pilot scale production was carried out, also including the red algae Palmaria palmata. In total 750 kg S. latissima and 195 kg P. palmata were processed. The protein content in the product increased from 10 to 20% of dry weight (dw) for S. latissima and from 12 to 28% for P. palmata, with yields of 79 and 69%, respectively. The ash content was reduced from 44 to 26% and from 12 to 5% of dw, respectively, for the two species. The main protein loss was free amino acids, which constituted approximately 10% of TAA in the feedstocks. Less essential than non-essential amino acids were lost, thus, the essential amino acids were enriched in the product.The work was funded by The Research Council of Norway, grant no. 244244.
- Marine macroalgal reference culture collection at the University of the Philippines Marine Science Institute (UP-MMARCC): Status and prospects for advancing Philippine phycologySantiañez, Wilfred John E.; Guerta, Christian Ace T.; Lastimoso, John Michael L. (Assocation of Systematic Biologists in the Philippines, 2022-11-16)Seaweeds research in the Philippines-from studies on their diversity, natural products chemistry, and the utilization of their derivatives-is largely based on spot collections of large and conspicuous components of the seaweed flora found along the coasts. Such efforts are often focused on commercially important seaweeds; thus, most of the smaller and even microscopic seaweeds remain understudied, if not completely overlooked. Consequently, little to none is known on many aspects of the biology, ecology, and even biochemistry of these components of the Philippine seaweed flora. To understand aspects of seaweed biology and serve as a facility for preserving the genetic resources of Philippine seaweeds, we established the Marine Macroalgal Reference Culture Collection at the University of the Philippines Marine Science Institute (UP-MMARCC). We are currently maintaining 446 seaweed strains (or isolates) collected from several coastal and offshore areas in the Philippines, the latter including the Kalayaan Island Group in the West Philippine Sea, and 25 isolates from Okinawa, Japan. To our knowledge, the UP-MMARCC is the most diverse and widely sampled culture collection in the Philippines so far. Moreover, our preliminary molecular-assisted biodiversity studies suggest that UP-MMARCC houses several isolates that are either new records to the Philippines or putative new taxa. We anticipate that with continued support, we will be able to sustain and expand our culture collection, not only to facilitate discoveries but also to cater to the needs of the Philippine seaweed industry and in support of its call for diversifying our seaweed commodities and their products.